#include <itkSymmetricForcesDemonsRegistrationFilter.h>
Inheritance diagram for itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >:


This class was contributed by Corinne Mattmann, ETH Zurich, Switzerland. based on a variation of the DemonsRegistrationFilter. The basic modification is to use equation (5) from Thirion's paper along with the modification for avoiding large deformations when gradients have small values.
SymmetricForcesDemonsRegistrationFilter implements the demons deformable algorithm that register two images by computing the deformation field which will map a moving image onto a fixed image.
A deformation field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.
This class is templated over the fixed image type, moving image type and the deformation field type.
The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial deformation field maybe set via SetInitialDeformationField or SetInput. If no initial field is set, a zero field is used as the initial condition.
The algorithm has one parameters: the number of iteration to be performed.
The output deformation field can be obtained via methods GetOutput or GetDeformationField.
This class make use of the finite difference solver hierarchy. Update for each iteration is computed in DemonsRegistrationFunction.
Definition at line 68 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef SmartPointer<const Self> itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::ConstPointer |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 78 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef DataObject::Pointer itk::ImageSource< TDeformationField >::DataObjectPointer [inherited] |
Smart Pointer type to a DataObject.
Reimplemented from itk::ProcessObject.
Definition at line 62 of file itkImageSource.h.
typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited] |
STL Array of SmartPointers to DataObjects
Definition at line 103 of file itkProcessObject.h.
typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited] |
Size type of an std::vector
Definition at line 112 of file itkProcessObject.h.
| typedef Superclass::DeformationFieldPointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldPointer |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 99 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef Superclass::DeformationFieldType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldType |
Deformation field type.
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 97 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef SymmetricForcesDemonsRegistrationFunction<FixedImageType,MovingImageType, DeformationFieldType> itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::DemonsRegistrationFunctionType |
DemonsRegistrationFilterFunction type.
Definition at line 111 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef Superclass::FiniteDifferenceFunctionType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::FiniteDifferenceFunctionType |
FiniteDifferenceFunction type.
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 103 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef FixedImageType::ConstPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::FixedImageConstPointer [inherited] |
Definition at line 93 of file itkPDEDeformableRegistrationFilter.h.
| typedef Superclass::FixedImagePointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::FixedImagePointer |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 89 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef Superclass::FixedImageType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::FixedImageType |
FixedImage image type.
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 85 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef InputImageType::ConstPointer itk::InPlaceImageFilter< TDeformationField , TDeformationField >::InputImageConstPointer [inherited] |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 84 of file itkInPlaceImageFilter.h.
typedef InputImageType::PixelType itk::InPlaceImageFilter< TDeformationField , TDeformationField >::InputImagePixelType [inherited] |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 86 of file itkInPlaceImageFilter.h.
typedef InputImageType::Pointer itk::InPlaceImageFilter< TDeformationField , TDeformationField >::InputImagePointer [inherited] |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 83 of file itkInPlaceImageFilter.h.
typedef InputImageType::RegionType itk::InPlaceImageFilter< TDeformationField , TDeformationField >::InputImageRegionType [inherited] |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 85 of file itkInPlaceImageFilter.h.
typedef Superclass::InputImageType itk::DenseFiniteDifferenceImageFilter< TDeformationField , TDeformationField >::InputImageType [inherited] |
Convenient typedefs
Reimplemented from itk::FiniteDifferenceImageFilter< TDeformationField, TDeformationField >.
Definition at line 78 of file itkDenseFiniteDifferenceImageFilter.h.
typedef TDeformationField ::PixelType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::InputPixelType [inherited] |
Definition at line 146 of file itkFiniteDifferenceImageFilter.h.
typedef NumericTraits< InputPixelType >::ValueType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::InputPixelValueType [inherited] |
Definition at line 151 of file itkFiniteDifferenceImageFilter.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)> itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputToOutputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an input region to an output region.
Definition at line 164 of file itkImageToImageFilter.h.
typedef MovingImageType::ConstPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::MovingImageConstPointer [inherited] |
Definition at line 98 of file itkPDEDeformableRegistrationFilter.h.
| typedef Superclass::MovingImagePointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::MovingImagePointer |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 93 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef Superclass::MovingImageType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::MovingImageType |
MovingImage image type.
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 92 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef FiniteDifferenceFunctionType::NeighborhoodScalesType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::NeighborhoodScalesType [inherited] |
Definition at line 160 of file itkFiniteDifferenceImageFilter.h.
typedef Superclass::OutputImagePixelType itk::InPlaceImageFilter< TDeformationField , TDeformationField >::OutputImagePixelType [inherited] |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 79 of file itkInPlaceImageFilter.h.
typedef Superclass::OutputImagePointer itk::InPlaceImageFilter< TDeformationField , TDeformationField >::OutputImagePointer [inherited] |
Reimplemented from itk::ImageSource< TDeformationField >.
Definition at line 77 of file itkInPlaceImageFilter.h.
typedef Superclass::OutputImageRegionType itk::InPlaceImageFilter< TDeformationField , TDeformationField >::OutputImageRegionType [inherited] |
Superclass typedefs.
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 78 of file itkInPlaceImageFilter.h.
typedef Superclass::OutputImageType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::OutputImageType [inherited] |
Types inherithed from the superclass
Reimplemented from itk::DenseFiniteDifferenceImageFilter< TDeformationField, TDeformationField >.
Definition at line 105 of file itkPDEDeformableRegistrationFilter.h.
typedef TDeformationField ::PixelType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::OutputPixelType [inherited] |
The pixel type of the output image will be used in computations.
Definition at line 145 of file itkFiniteDifferenceImageFilter.h.
typedef NumericTraits< OutputPixelType >::ValueType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::OutputPixelValueType [inherited] |
Extract value type in case the pixel is of vector type
Definition at line 150 of file itkFiniteDifferenceImageFilter.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)> itk::ImageToImageFilter< TDeformationField , TDeformationField >::OutputToInputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an output region to an input region.
Definition at line 169 of file itkImageToImageFilter.h.
typedef PDEDeformableRegistrationFunction<FixedImageType,MovingImageType, DeformationFieldType> itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::PDEDeformableRegistrationFunctionType [inherited] |
PDEDeformableRegistrationFilterFunction type.
Definition at line 113 of file itkPDEDeformableRegistrationFilter.h.
typedef Superclass::PixelType itk::DenseFiniteDifferenceImageFilter< TDeformationField , TDeformationField >::PixelType [inherited] |
The pixel type of the output image will be used in computations. Inherited from the superclass.
Reimplemented from itk::FiniteDifferenceImageFilter< TDeformationField, TDeformationField >.
Definition at line 92 of file itkDenseFiniteDifferenceImageFilter.h.
| typedef SmartPointer<Self> itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::Pointer |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 77 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef FiniteDifferenceFunctionType::RadiusType itk::FiniteDifferenceImageFilter< TDeformationField , TDeformationField >::RadiusType [inherited] |
Definition at line 159 of file itkFiniteDifferenceImageFilter.h.
| typedef SymmetricForcesDemonsRegistrationFilter itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::Self |
Standard class typedefs.
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 74 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef PDEDeformableRegistrationFilter< TFixedImage, TMovingImage,TDeformationField> itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::Superclass |
Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
Definition at line 76 of file itkSymmetricForcesDemonsRegistrationFilter.h.
typedef UpdateBufferType::RegionType itk::DenseFiniteDifferenceImageFilter< TDeformationField , TDeformationField >::ThreadRegionType [protected, inherited] |
The type of region used for multithreading
Definition at line 143 of file itkDenseFiniteDifferenceImageFilter.h.
| typedef FiniteDifferenceFunctionType::TimeStepType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >::TimeStepType |
Take timestep type from the FiniteDifferenceFunction.
Reimplemented from itk::DenseFiniteDifferenceImageFilter< TDeformationField, TDeformationField >.
Definition at line 106 of file itkSymmetricForcesDemonsRegistrationFilter.h.
| typedef OutputImageType itk::DenseFiniteDifferenceImageFilter< TDeformationField , TDeformationField >:: |