#include <itkBinaryMaskToNarrowBandPointSetFilter.h>
Inheritance diagram for itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >:
BinaryMaskToNarrowBandPointSetFilter takes a binary image as input and generates a PointSet as output. The point set contains points around the contours of the binary mask in the image. The pixel values of the point set are obtained as the distances from the point to the edge of the binary mask.
This filter is intended to be used for initializing the process of NarrowBand-to-Image Registration.
The filter is templated over the input image type and the output mesh type. The only restriction is that the dimension of points in the mesh should be equal to the input image dimension. The PixelType in the mesh should be capable to represent distance values.
Definition at line 54 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef SmartPointer<const Self> itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::ConstPointer |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 62 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
typedef DataObject::Pointer itk::MeshSource< TOutputMesh >::DataObjectPointer [inherited] |
Some convenient typedefs.
Reimplemented from itk::ProcessObject.
Reimplemented in itk::SpatialObjectToPointSetFilter< TInputSpatialObject, TOutputPointSet >.
Definition at line 56 of file itkMeshSource.h.
typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited] |
STL Array of SmartPointers to DataObjects
Definition at line 103 of file itkProcessObject.h.
typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited] |
Size type of an std::vector
Definition at line 112 of file itkProcessObject.h.
| typedef DistanceFilterType::Pointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::DistanceFilterPointer |
Definition at line 109 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef ReinitializeLevelSetImageFilter< RealImageType > itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::DistanceFilterType |
The ReinitializeLevelSet filter is used to evaluate the distance from every pixel to the border of the binary mask. It uses internally a FastMarching filter for propagating a from from the edges of the binary mask.
Definition at line 107 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef InputImageType::ConstPointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::InputImageConstPointer |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 72 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef ImageRegionConstIteratorWithIndex<InputImageType> itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::InputImageIterator |
Definition at line 76 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef InputImageType::PixelType itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::InputImagePixelType |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 74 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
typedef InputImageType::Pointer itk::ImageToMeshFilter< TInputImage, TOutputMesh >::InputImagePointer [inherited] |
Reimplemented in itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >.
Definition at line 53 of file itkImageToMeshFilter.h.
| typedef InputImageType::RegionType itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::InputImageRegionType |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 73 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef TInputImage itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::InputImageType |
Some typedefs associated with the input images.
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 68 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef DistanceFilterType::NodeContainer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::NodeContainer |
Definition at line 111 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef DistanceFilterType::NodeContainerPointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::NodeContainerPointer |
Definition at line 110 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef NodeContainer::Element itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::NodeType |
Definition at line 112 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::ConstPointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::OutputMeshConstPointer |
Definition at line 83 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::Pointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::OutputMeshPointer |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 82 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef TOutputMesh itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::OutputMeshType |
Some typedefs associated with the output mesh.
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 80 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::PointDataContainer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointDataContainer |
Definition at line 88 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef PointDataContainer::Iterator itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointDataContainerIterator |
Definition at line 90 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef PointDataContainer::Pointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointDataContainerPointer |
Definition at line 89 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef SmartPointer<Self> itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::Pointer |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 61 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::PointIdentifier itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointIdentifier |
Definition at line 85 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::PointsContainer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointsContainer |
Definition at line 84 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef PointsContainer::Iterator itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointsContainerIterator |
Definition at line 87 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef PointsContainer::Pointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointsContainerPointer |
Definition at line 86 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef OutputMeshType::PointType itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::PointType |
Definition at line 81 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef itk::Image< float, itkGetStaticConstMacro(ImageDimension) > itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::RealImageType |
Float image type to be used by the ReinitializeLevelSet image filter
Definition at line 100 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef RescaleFilterType::Pointer itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::RescaleFilterPointer |
Definition at line 121 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef RescaleIntensityImageFilter< InputImageType, RealImageType > itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::RescaleFilterType |
The ReinitializeLevelSetImageFilter expect the input to be binary withing the range [-0.5:0.5]. This filte will scale the input to fit in this range.
Definition at line 119 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef BinaryMaskToNarrowBandPointSetFilter itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::Self |
Standard class typedefs.
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 59 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| typedef ProcessObject itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::Superclass |
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
Definition at line 60 of file itkBinaryMaskToNarrowBandPointSetFilter.h.
| itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::BinaryMaskToNarrowBandPointSetFilter | ( | ) | [protected] |
| itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::~BinaryMaskToNarrowBandPointSetFilter | ( | ) | [protected] |
| virtual void itk::ProcessObject::AbortGenerateDataOff | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::AbortGenerateDataOn | ( | ) | [virtual, inherited] |
Turn on and off the AbortGenerateData flag.
| virtual void itk::ProcessObject::AddInput | ( | DataObject * | input | ) | [protected, virtual, inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| virtual void itk::ProcessObject::AddOutput | ( | DataObject * | output | ) | [protected, virtual, inherited] |
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual void itk::ProcessObject::CacheInputReleaseDataFlags | ( | ) | [protected, virtual, inherited] |
Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| virtual void itk::ProcessObject::EnlargeOutputRequestedRegion | ( | DataObject * | ) | [inline, virtual, inherited] |
Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.
Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >, itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >, itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >, itk::FFTRealToComplexConjugateImageFilter< TPixel, Dimension >, itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >, itk::IsoContourDistanceImageFilter< TInputImage, TOutputImage >, itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >, itk::KLMRegionGrowImageFilter< TInputImage, TOutputImage >, itk::MRFImageFilter< TInputImage, TClassifiedImage >, itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, itk::ReinitializeLevelSetImageFilter< TLevelSet >, itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >, itk::WatershedImageFilter< TInputImage >, itk::BlackTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::BSplineDecompositionImageFilter< TInputImage, TOutputImage >, itk::ClosingByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::ConnectedComponentImageFilter< TInputImage, TOutputImage, TMaskImage >, itk::ConnectedThresholdImageFilter< TInputImage, TOutputImage >, itk::ContourDirectedMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::ContourMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DirectedHausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DoubleThresholdImageFilter< TInputImage, TOutputImage >, itk::ExtractOrthogonalSwath2DImageFilter< TImage >, itk::GradientMagnitudeRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GradientRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedClosingImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedOpeningImageFilter< TInputImage, TOutputImage >, itk::GrayscaleFillholeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicDilateImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicErodeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGrindPeakImageFilter< TInputImage, TOutputImage >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::HausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::HConcaveImageFilter< TInputImage, TOutputImage >, itk::HConvexImageFilter< TInputImage, TOutputImage >, itk::HessianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::HMaximaImageFilter< TInputImage, TOutputImage >, itk::HMinimaImageFilter< TInputImage, TOutputImage >, itk::HoughTransform2DCirclesImageFilter< TInputPixelType, TOutputPixelType >, itk::HoughTransform2DLinesImageFilter< TInputPixelType, TOutputPixelType >, itk::ImportImageFilter< TPixel, VImageDimension >, itk::IsolatedConnectedImageFilter< TInputImage, TOutputImage >, itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >, itk::LaplacianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::MinimumMaximumImageFilter< TInputImage >, itk::NeighborhoodConnectedImageFilter< TInputImage, TOutputImage >, itk::OpeningByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::OrientImageFilter< TInputImage, TOutputImage >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, TCompare >, itk::RecursiveSeparableImageFilter< TInputImage, TOutputImage >, itk::RegionOfInterestImageFilter< TInputImage, TOutputImage >, itk::ShrinkImageFilter< TInputImage, TOutputImage >, itk::SimilarityIndexImageFilter< TInputImage1, TInputImage2 >, itk::SmoothingRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::StatisticsImageFilter< TInputImage >, itk::TobogganImageFilter< TInputImage >, itk::VectorConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::WhiteTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageFileReader< TOutputImage, ConvertPixelTraits >, itk::ImageSeriesReader< TOutputImage >, itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >, itk::MorphologicalWatershedImageFilter< TInputImage, TOutputImage >, itk::RegionalMaximaImageFilter< TInputImage, TOutputImage >, itk::RegionalMinimaImageFilter< TInputImage, TOutputImage >, itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, TFunction1, TFunction2 >, itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, std::greater< TOutputImage::PixelType > >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, std::less< TOutputImage::PixelType > >, itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::greater< TInputImage::PixelType >, std::greater< TOutputImage::PixelType > >, and itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.
Definition at line 225 of file itkProcessObject.h.
| void itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::GenerateData | ( | void | ) | [virtual] |
Some typedefs associated with the output mesh.
Reimplemented from itk::ProcessObject.
| void itk::MeshSource< TOutputMesh >::GenerateInputRequestedRegion | ( | ) | [protected, virtual, inherited] |
Requested region of Mesh is specified as i of N unstructured regions. Since all DataObjects should be able to set the requested region in unstructured form, just copy output->RequestedRegion all inputs.
Reimplemented from itk::ProcessObject.
| void itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::GenerateOutputInformation | ( | void | ) | [virtual] |
Some typedefs associated with the output mesh.
Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.
| virtual void itk::ProcessObject::GenerateOutputRequestedRegion | ( | DataObject * | output | ) | [protected, virtual, inherited] |
Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.
Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.
Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>, and itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >.
| virtual const bool& itk::ProcessObject::GetAbortGenerateData | ( | ) | [virtual, inherited] |
Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.
| virtual float itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >::GetBandWidth | ( | ) | [virtual] |
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
| const DataObject* itk::ProcessObject::GetInput | ( | unsigned int | idx | ) | const [protected, inherited] |
| const InputImageType* itk::ImageToMeshFilter< TInputImage, TOutputMesh >::GetInput | ( | unsigned int | idx | ) | [inherited] |
Get the input image of this process object.
Reimplemented from itk::ProcessObject.
| DataObjectPointerArray& itk::ProcessObject::GetInputs | ( | ) | [inline, inherited] |
Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.
Definition at line 108 of file itkProcessObject.h.
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >,