ITK  4.9.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Member Functions | Private Attributes | List of all members
itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension > Class Template Reference

#include <itkSpatialObjectToImageStatisticsCalculator.h>

+ Inheritance diagram for itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >:
+ Collaboration diagram for itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >:

Detailed Description

template<typename TInputImage, typename TInputSpatialObject, unsigned int TSampleDimension = 1>
class itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >

This calculator computes the mean and the covariance matrice of a certain region of an image specified by a spatial object.

Examples:
Examples/SpatialObjects/SpatialObjectToImageStatisticsCalculator.cxx.

Definition at line 37 of file itkSpatialObjectToImageStatisticsCalculator.h.

Public Types

typedef NumericTraits
< PixelType >::AccumulateType 
AccumulateType
 
typedef SmartPointer< const SelfConstPointer
 
typedef TInputImage::ConstPointer ImageConstPointer
 
typedef TInputImage::Pointer ImagePointer
 
typedef TInputImage ImageType
 
typedef TInputImage::IndexType IndexType
 
typedef
itk::FloodFilledSpatialFunctionConditionalConstIterator
< ImageType, SpatialObjectType
IteratorType
 
typedef Matrix< double,
TSampleDimension,
TSampleDimension > 
MatrixType
 
typedef TInputImage::PixelType PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
itk::Statistics::ListSample
< VectorType
SampleType
 
typedef
SpatialObjectToImageStatisticsCalculator 
Self
 
typedef
SpatialObjectType::ConstPointer 
SpatialObjectConstPointer
 
typedef SpatialObjectType::Pointer SpatialObjectPointer
 
typedef TInputSpatialObject SpatialObjectType
 
typedef Object Superclass
 
typedef Vector< double,
TSampleDimension > 
VectorType
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
const MatrixTypeGetCovarianceMatrix () const
 
const VectorTypeGetMean () const
 
virtual const char * GetNameOfClass () const
 
virtual SizeValueType GetNumberOfPixels () const
 
AccumulateType GetSum () const
 
virtual void SetImage (const ImageType *_arg)
 
virtual void SetSpatialObject (SpatialObjectType *_arg)
 
void Update ()
 
virtual void SetSampleDirection (unsigned int _arg)
 
virtual unsigned int GetSampleDirection () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) override
 
virtual void UnRegister () const noexceptoverride
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static const unsigned int ImageDimension = ImageType::ImageDimension
 
static const unsigned int ObjectDimension = TInputSpatialObject::ObjectDimension
 
static const unsigned int SampleDimension = TSampleDimension
 

Protected Member Functions

bool ComputeStatistics ()
 
virtual void PrintSelf (std::ostream &os, Indent indent) const override
 
 SpatialObjectToImageStatisticsCalculator ()
 
virtual ~SpatialObjectToImageStatisticsCalculator ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Member Functions

void operator= (const Self &) ITK_DELETE_FUNCTION
 
 SpatialObjectToImageStatisticsCalculator (const Self &) ITK_DELETE_FUNCTION
 

Private Attributes

MatrixType m_CovarianceMatrix
 
ImageConstPointer m_Image
 
ModifiedTimeType m_InternalImageTime
 
ModifiedTimeType m_InternalSpatialObjectTime
 
VectorType m_Mean
 
TimeStamp m_ModifiedTime
 
SizeValueType m_NumberOfPixels
 
SampleType::Pointer m_Sample
 
unsigned int m_SampleDirection
 
SpatialObjectPointer m_SpatialObject
 
AccumulateType m_Sum
 

Additional Inherited Members

- Protected Attributes inherited from itk::LightObject
AtomicInt< int > m_ReferenceCount
 

Member Typedef Documentation

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef NumericTraits< PixelType >::AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::AccumulateType
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef SmartPointer< const Self > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ConstPointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputImage::ConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageConstPointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputImage::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImagePointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputImage itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageType

Type definitions for the input image.

Definition at line 50 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputImage::IndexType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::IndexType
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef itk::FloodFilledSpatialFunctionConditionalConstIterator< ImageType, SpatialObjectType > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::IteratorType

Type definition of the flood fill iterator

Definition at line 77 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef Matrix< double, TSampleDimension, TSampleDimension > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::MatrixType
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputImage::PixelType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::PixelType
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef SmartPointer< Self > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Pointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef itk::Statistics::ListSample< VectorType > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SampleType

Type definitions for the samples

Definition at line 84 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef SpatialObjectToImageStatisticsCalculator itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Self

Standard class typedefs.

Definition at line 41 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef SpatialObjectType::ConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectConstPointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef SpatialObjectType::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectPointer
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef TInputSpatialObject itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectType

Type definitions for the input spatial object.

Definition at line 71 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef Object itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Superclass
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
typedef Vector< double, TSampleDimension > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::VectorType

Vector and Matrix Type

Definition at line 80 of file itkSpatialObjectToImageStatisticsCalculator.h.

Constructor & Destructor Documentation

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectToImageStatisticsCalculator ( )
protected
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::~SpatialObjectToImageStatisticsCalculator ( )
inlineprotectedvirtual
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectToImageStatisticsCalculator ( const Self )
private

Member Function Documentation

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
bool itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ComputeStatistics ( )
protected
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual::itk::LightObject::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
const MatrixType& itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetCovarianceMatrix ( ) const
inline
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
const VectorType& itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetMean ( ) const
inline
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual const char* itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::Object.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual SizeValueType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetNumberOfPixels ( ) const
virtual

Get the number of pixels inside the object

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetSampleDirection ( ) const
virtual

Set/Get the direction of the sample

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetSum ( ) const
inline
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
static Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::New ( )
static

Method for creation through the object factory.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::operator= ( const Self )
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetImage ( const ImageType _arg)
virtual

Set the input image.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetSampleDirection ( unsigned int  _arg)
virtual

Set/Get the direction of the sample

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetSpatialObject ( SpatialObjectType _arg)
virtual

Set the input spatial object.

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Update ( )

Compute of the input image.

Member Data Documentation

template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageDimension = ImageType::ImageDimension
static
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
MatrixType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_CovarianceMatrix
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
ImageConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Image
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
ModifiedTimeType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_InternalImageTime
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
ModifiedTimeType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_InternalSpatialObjectTime
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
VectorType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Mean
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
TimeStamp itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_ModifiedTime
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
SizeValueType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_NumberOfPixels
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
SampleType::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Sample
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_SampleDirection
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
SpatialObjectPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_SpatialObject
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Sum
private
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ObjectDimension = TInputSpatialObject::ObjectDimension
static
template<typename TInputImage , typename TInputSpatialObject , unsigned int TSampleDimension = 1>
const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SampleDimension = TSampleDimension
static

The documentation for this class was generated from the following file: