ITK  4.6.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Member Functions | Private Attributes | List of all members
itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions > Class Template Reference

#include <itkTimeVaryingBSplineVelocityFieldTransform.h>

+ Inheritance diagram for itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >:
+ Collaboration diagram for itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >:

Detailed Description

template<typename TScalar, unsigned int NDimensions>
class itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >

Integrate a time-varying velocity field represented by a B-spline control point lattice.

Diffeomorphisms are topology-preserving mappings that are useful for describing biologically plausible deformations. Mathematically, a diffeomorphism, $ \phi $, is generated from a time-varying velocity field, v, as described by the integral equation:

\[ \phi(t_b) = \phi(t_a) + \int_{t_a}^{t_b} v(\phi(t),t) dt \]

In typical registration applications it is computationally more efficient to sample the B-spline transform to its corresponding displacement field. Therefore, the user needs to specify the domain parameters of that displacement field using the following functions:

It's important that these parameters match up with the fixed parameters of this transform which are defined as the parameters of the (N+1)-D B-spline grid representing the continuous velocity field. This control point lattice is set using SetTimeVaryingVelocityFieldControlPointLattice() or it can be created by setting the fixed parameters.

Note: For readability of the code, it is important to note that we store the control point lattice in the m_VelocityField variable since they are of the same type. It's only when we call IntegrateVelocityField() that a sampled velocity field is created from the control point lattice.

Author
Nick Tustison
Brian Avants

Definition at line 68 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::DerivativeType DerivativeType
 
typedef
DisplacementFieldType::DirectionType 
DisplacementFieldDirectionType
 
typedef
DisplacementFieldType::PointType 
DisplacementFieldPointType
 
typedef
DisplacementFieldType::SizeType 
DisplacementFieldSizeType
 
typedef
DisplacementFieldType::SpacingType 
DisplacementFieldSpacingType
 
typedef
Superclass::DisplacementFieldType 
DisplacementFieldType
 
typedef
DisplacementFieldType::PixelType 
DisplacementVectorType
 
typedef
Superclass::InterpolatorType 
InterpolatorType
 
typedef
Superclass::InverseTransformBasePointer 
InverseTransformBasePointer
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef Superclass::ParametersType ParametersType
 
typedef ParametersType::ValueType ParametersValueType
 
typedef SmartPointer< SelfPointer
 
typedef Superclass::ScalarType ScalarType
 
typedef
TimeVaryingBSplineVelocityFieldTransform 
Self
 
typedef VelocityFieldTransform
< TScalar, NDimensions > 
Superclass
 
typedef VelocityFieldType::Pointer TimeVaryingVelocityFieldControlPointLatticePointer
 
typedef VelocityFieldType TimeVaryingVelocityFieldControlPointLatticeType
 
typedef
VelocityFieldType::DirectionType 
VelocityFieldDirectionType
 
typedef
Superclass::VelocityFieldInterpolatorType 
VelocityFieldIntegratorType
 
typedef
VelocityFieldType::PointType 
VelocityFieldPointType
 
typedef VelocityFieldType::SizeType VelocityFieldSizeType
 
typedef
VelocityFieldType::SpacingType 
VelocityFieldSpacingType
 
typedef
Superclass::VelocityFieldType 
VelocityFieldType
 
- Public Types inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::DerivativeType DerivativeType
 
typedef
VelocityFieldType::DirectionType 
DirectionType
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef
Superclass::DisplacementFieldType 
DisplacementFieldType
 
typedef
VelocityFieldType::IndexType 
IndexType
 
typedef Superclass::InputPointType InputPointType
 
typedef
Superclass::InputVectorPixelType 
InputVectorPixelType
 
typedef Superclass::InputVectorType InputVectorType
 
typedef
Superclass::InverseTransformBasePointer 
InverseTransformBasePointer
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef
ImageVectorOptimizerParametersHelper
< ScalarType, Dimension,
VelocityFieldDimension
OptimizerParametersHelperType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef
Superclass::OutputVectorPixelType 
OutputVectorPixelType
 
typedef
Superclass::OutputVectorType 
OutputVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef
VelocityFieldType::PixelType 
PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
VelocityFieldType::PointType 
PointType
 
typedef
VelocityFieldType::RegionType 
RegionType
 
typedef Superclass::ScalarType ScalarType
 
typedef VelocityFieldTransform Self
 
typedef VelocityFieldType::SizeType SizeType
 
typedef
VelocityFieldType::SpacingType 
SpacingType
 
typedef
DisplacementFieldTransform
< TScalar, NDimensions > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
typedef
VelocityFieldInterpolatorType::Pointer 
VelocityFieldInterpolatorPointer
 
typedef
VectorInterpolateImageFunction
< VelocityFieldType,
ScalarType
VelocityFieldInterpolatorType
 
typedef VelocityFieldType::Pointer VelocityFieldPointer
 
typedef Image
< OutputVectorType,
VelocityFieldDimension
VelocityFieldType
 
- Public Types inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::DerivativeType DerivativeType
 
typedef
DisplacementFieldType::DirectionType 
DirectionType
 
typedef
DisplacementFieldType::ConstPointer 
DisplacementFieldConstPointer
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef Image
< OutputVectorType, Dimension
DisplacementFieldType
 
typedef
DisplacementFieldType::IndexType 
IndexType
 
typedef
Superclass::InputCovariantVectorType 
InputCovariantVectorType
 
typedef
Superclass::InputDiffusionTensor3DType 
InputDiffusionTensor3DType
 
typedef Superclass::InputPointType InputPointType
 
typedef CovariantVector
< ScalarType,
InputDiffusionTensor3DType::Dimension > 
InputTensorEigenVectorType
 
typedef
Superclass::InputVectorPixelType 
InputVectorPixelType
 
typedef Superclass::InputVectorType InputVectorType
 
typedef
Superclass::InputVnlVectorType 
InputVnlVectorType
 
typedef
VectorInterpolateImageFunction
< DisplacementFieldType,
ScalarType
InterpolatorType
 
typedef
Superclass::InverseTransformBasePointer 
InverseTransformBasePointer
 
typedef Superclass::JacobianType JacobianType
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef
ImageVectorOptimizerParametersHelper
< ScalarType,
OutputVectorType::Dimension,
Dimension
OptimizerParametersHelperType
 
typedef
Superclass::OutputCovariantVectorType 
OutputCovariantVectorType
 
typedef
Superclass::OutputDiffusionTensor3DType 
OutputDiffusionTensor3DType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef CovariantVector
< ScalarType,
OutputDiffusionTensor3DType::Dimension > 
OutputTensorEigenVectorType
 
typedef
Superclass::OutputVectorPixelType 
OutputVectorPixelType
 
typedef
Superclass::OutputVectorType 
OutputVectorType
 
typedef
Superclass::OutputVnlVectorType 
OutputVnlVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef
DisplacementFieldType::PixelType 
PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
DisplacementFieldType::PointType 
PointType
 
typedef
DisplacementFieldType::RegionType 
RegionType
 
typedef Superclass::ScalarType ScalarType
 
typedef DisplacementFieldTransform Self
 
typedef
DisplacementFieldType::SizeType 
SizeType
 
typedef
DisplacementFieldType::SpacingType 
SpacingType
 
typedef Transform< TScalar,
NDimensions, NDimensions > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
- Public Types inherited from itk::Transform< TScalar, NDimensions, NDimensions >
typedef SmartPointer< const SelfConstPointer
 
typedef Array
< ParametersValueType
DerivativeType
 
typedef Matrix< double,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
DirectionChangeMatrix
 
typedef CovariantVector
< TScalar, NInputDimensions > 
InputCovariantVectorType
 
typedef DiffusionTensor3D
< TScalar > 
InputDiffusionTensor3DType
 
typedef Matrix< double,
itkGetStaticConstMacro(InputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
InputDirectionMatrix
 
typedef Point< TScalar,
NInputDimensions > 
InputPointType
 
typedef
SymmetricSecondRankTensor
< TScalar, NInputDimensions > 
InputSymmetricSecondRankTensorType
 
typedef VariableLengthVector
< TScalar > 
InputVectorPixelType
 
typedef Vector< TScalar,
NInputDimensions > 
InputVectorType
 
typedef vnl_vector_fixed
< TScalar, NInputDimensions > 
InputVnlVectorType
 
typedef
InverseTransformBaseType::Pointer 
InverseTransformBasePointer
 
typedef Transform< TScalar,
NOutputDimensions,
NInputDimensions > 
InverseTransformBaseType
 
typedef Array2D
< ParametersValueType
JacobianType
 
typedef Matrix< TScalar,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
MatrixType
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef CovariantVector
< TScalar, NOutputDimensions > 
OutputCovariantVectorType
 
typedef DiffusionTensor3D
< TScalar > 
OutputDiffusionTensor3DType
 
typedef Matrix< double,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(OutputSpaceDimension)> 
OutputDirectionMatrix
 
typedef Point< TScalar,
NOutputDimensions > 
OutputPointType
 
typedef
SymmetricSecondRankTensor
< TScalar, NOutputDimensions > 
OutputSymmetricSecondRankTensorType
 
typedef VariableLengthVector
< TScalar > 
OutputVectorPixelType
 
typedef Vector< TScalar,
NOutputDimensions > 
OutputVectorType
 
typedef vnl_vector_fixed
< TScalar, NOutputDimensions > 
OutputVnlVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef SmartPointer< SelfPointer
 
typedef TScalar ScalarType
 
typedef Transform Self
 
typedef TransformBaseTemplate
< TScalar > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
- Public Types inherited from itk::TransformBaseTemplate< TScalar >
typedef SmartPointer< const SelfConstPointer
 
typedef IdentifierType NumberOfParametersType
 
typedef OptimizerParameters
< ParametersValueType
ParametersType
 
typedef TScalar ParametersValueType
 
typedef SmartPointer< SelfPointer
 
typedef TransformBaseTemplate Self
 
typedef Object Superclass
 
enum  TransformCategoryType {
  UnknownTransformCategory =0,
  Linear =1,
  BSpline =2,
  Spline =3,
  DisplacementField =4,
  VelocityField =5
}
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual const char * GetNameOfClass () const
 
VelocityFieldType::Pointer GetTimeVaryingVelocityFieldControlPointLattice ()
 
virtual void IntegrateVelocityField ()
 
virtual void SetTimeVaryingVelocityFieldControlPointLattice (VelocityFieldType *fieldLattice)
 
virtual void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0)
 
virtual void SetVelocityFieldOrigin (VelocityFieldPointType _arg)
 
virtual VelocityFieldPointType GetVelocityFieldOrigin () const
 
virtual void SetVelocityFieldSpacing (VelocityFieldSpacingType _arg)
 
virtual VelocityFieldSpacingType GetVelocityFieldSpacing () const
 
virtual void SetVelocityFieldSize (VelocityFieldSizeType _arg)
 
virtual VelocityFieldSizeType GetVelocityFieldSize () const
 
virtual void SetVelocityFieldDirection (VelocityFieldDirectionType _arg)
 
virtual VelocityFieldDirectionType GetVelocityFieldDirection () const
 
virtual void SetSplineOrder (unsigned int _arg)
 
virtual unsigned int GetSplineOrder () const
 
- Public Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
bool GetInverse (Self *inverse) const
 
virtual InverseTransformBasePointer GetInverseTransform () const
 
virtual ScalarType GetLowerTimeBound () const
 
virtual unsigned int GetNumberOfIntegrationSteps () const
 
virtual ScalarType GetUpperTimeBound () const
 
virtual const unsigned long & GetVelocityFieldSetTime () const
 
virtual void SetDisplacementField (DisplacementFieldType *_arg)
 
virtual void SetFixedParameters (const ParametersType &)
 
virtual void SetLowerTimeBound (ScalarType _arg)
 
virtual void SetNumberOfIntegrationSteps (unsigned int _arg)
 
virtual void SetUpperTimeBound (ScalarType _arg)
 
virtual void SetVelocityField (VelocityFieldType *)
 
virtual VelocityFieldTypeGetModifiableVelocityField ()
 
virtual const VelocityFieldTypeGetVelocityField () const
 
virtual void SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *)
 
virtual
VelocityFieldInterpolatorType
GetModifiableVelocityFieldInterpolator ()
 
virtual const
VelocityFieldInterpolatorType
GetVelocityFieldInterpolator () const
 
- Public Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
virtual void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const
 
virtual void ComputeJacobianWithRespectToParameters (const IndexType &, JacobianType &j) const
 
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const
 
virtual void ComputeJacobianWithRespectToPosition (const IndexType &x, JacobianType &j) const
 
virtual const ModifiedTimeTypeGetDisplacementFieldSetTime () const
 
bool GetInverse (Self *inverse) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const InputPointType &point, JacobianType &jacobian, bool useSVD=false) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const IndexType &index, JacobianType &jacobian, bool useSVD=false) const
 
virtual NumberOfParametersType GetNumberOfLocalParameters (void) const
 
virtual TransformCategoryType GetTransformCategory () const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const
 
OutputVectorPixelType TransformDiffusionTensor (const InputVectorPixelType &) const
 
virtual OutputPointType TransformPoint (const InputPointType &thisPoint) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const
 
virtual void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0)
 
virtual DisplacementFieldTypeGetModifiableDisplacementField ()
 
virtual const
DisplacementFieldType
GetDisplacementField () const
 
virtual void SetInverseDisplacementField (DisplacementFieldType *inverseDisplacementField)
 
virtual DisplacementFieldTypeGetModifiableInverseDisplacementField ()
 
virtual const
DisplacementFieldType
GetInverseDisplacementField () const
 
virtual void SetInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInterpolator ()
 
virtual const InterpolatorTypeGetInterpolator () const
 
virtual void SetInverseInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInverseInterpolator ()
 
virtual const InterpolatorTypeGetInverseInterpolator () const
 
virtual OutputVectorType TransformVector (const InputVectorType &) const
 
OutputDiffusionTensor3DType TransformDiffusionTensor (const InputDiffusionTensor3DType &) const
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const
 
virtual void SetParameters (const ParametersType &params)
 
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &j) const
 
- Public Member Functions inherited from itk::Transform< TScalar, NDimensions, NDimensions >
virtual void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &jacobian) const
 
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const =0
 
virtual void ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &jacobian, JacobianType &) const
 
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianType &) const
 
virtual const ParametersTypeGetFixedParameters (void) const
 
unsigned int GetInputSpaceDimension (void) const
 
bool GetInverse (Self *) const
 
virtual NumberOfParametersType GetNumberOfParameters (void) const
 
unsigned int GetOutputSpaceDimension (void) const
 
virtual const ParametersTypeGetParameters (void) const
 
virtual std::string GetTransformTypeAsString () const
 
virtual bool IsLinear () const
 
 itkCloneMacro (Self)
 
virtual void SetParametersByValue (const ParametersType &p)
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &tensor, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputPointType TransformPoint (const InputPointType &) const =0
 
virtual
OutputSymmetricSecondRankTensorType 
TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &tensor, const InputPointType &point) const
 
virtual
OutputSymmetricSecondRankTensorType 
TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputVectorType TransformVector (const InputVectorType &) const
 
virtual OutputVectorType TransformVector (const InputVectorType &vector, const InputPointType &point) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual void UpdateTransformParameters (const DerivativeType &update, TScalar factor=1.0)
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const ITK_OVERRIDE
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) ITK_OVERRIDE
 
virtual void UnRegister () const ITK_OVERRIDE
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static const unsigned int Dimension = NDimensions
 
static const unsigned int VelocityFieldDimension = NDimensions + 1
 
- Static Public Attributes inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
static const unsigned int Dimension = NDimensions
 
static const unsigned int VelocityFieldDimension = NDimensions + 1
 
- Static Public Attributes inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
static const unsigned int Dimension = NDimensions
 
- Static Public Attributes inherited from itk::Transform< TScalar, NDimensions, NDimensions >
static const unsigned int InputSpaceDimension
 
static const unsigned int OutputSpaceDimension
 

Protected Member Functions

void PrintSelf (std::ostream &os, Indent indent) const
 
 TimeVaryingBSplineVelocityFieldTransform ()
 
virtual ~TimeVaryingBSplineVelocityFieldTransform ()
 
- Protected Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
DisplacementFieldType::Pointer CopyDisplacementField (const DisplacementFieldType *) const
 
virtual LightObject::Pointer InternalClone () const
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 VelocityFieldTransform ()
 
virtual ~VelocityFieldTransform ()
 
- Protected Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
 DisplacementFieldTransform ()
 
virtual ~DisplacementFieldTransform ()
 
- Protected Member Functions inherited from itk::Transform< TScalar, NDimensions, NDimensions >
OutputDiffusionTensor3DType PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType, const JacobianType) const
 
 Transform ()
 
 Transform (NumberOfParametersType NumberOfParameters)
 
virtual ~Transform ()
 
- Protected Member Functions inherited from itk::TransformBaseTemplate< TScalar >
 TransformBaseTemplate ()
 
virtual ~TransformBaseTemplate ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Member Functions

void operator= (const Self &)
 
 TimeVaryingBSplineVelocityFieldTransform (const Self &)
 

Private Attributes

unsigned int m_SplineOrder
 
bool m_TemporalPeriodicity
 
VelocityFieldDirectionType m_VelocityFieldDirection
 
VelocityFieldPointType m_VelocityFieldOrigin
 
VelocityFieldSizeType m_VelocityFieldSize
 
VelocityFieldSpacingType m_VelocityFieldSpacing
 

Additional Inherited Members

- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 
- Protected Attributes inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
ScalarType m_LowerTimeBound
 
unsigned int m_NumberOfIntegrationSteps
 
ScalarType m_UpperTimeBound
 
VelocityFieldPointer m_VelocityField
 
VelocityFieldInterpolatorType::Pointer m_VelocityFieldInterpolator
 
unsigned long m_VelocityFieldSetTime
 
- Protected Attributes inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
DisplacementFieldType::Pointer m_DisplacementField
 
ModifiedTimeType m_DisplacementFieldSetTime
 
JacobianType m_IdentityJacobian
 
InterpolatorType::Pointer m_Interpolator
 
DisplacementFieldType::Pointer m_InverseDisplacementField
 
InterpolatorType::Pointer m_InverseInterpolator
 
- Protected Attributes inherited from itk::Transform< TScalar, NDimensions, NDimensions >
DirectionChangeMatrix m_DirectionChange
 
ParametersType m_FixedParameters
 
ParametersType m_Parameters
 
- Protected Attributes inherited from itk::LightObject
InternalReferenceCountType m_ReferenceCount
 
SimpleFastMutexLock m_ReferenceCountLock
 

Member Typedef Documentation

template<typename TScalar , unsigned int NDimensions>
typedef SmartPointer<const Self> itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::ConstPointer
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::DerivativeType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DerivativeType

Derivative type

Definition at line 105 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef DisplacementFieldType::DirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementFieldDirectionType
template<typename TScalar , unsigned int NDimensions>
typedef DisplacementFieldType::PointType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementFieldPointType
template<typename TScalar , unsigned int NDimensions>
typedef DisplacementFieldType::SizeType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementFieldSizeType
template<typename TScalar , unsigned int NDimensions>
typedef DisplacementFieldType::SpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementFieldSpacingType
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::DisplacementFieldType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementFieldType

Field types.

Definition at line 93 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef DisplacementFieldType::PixelType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::DisplacementVectorType
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::InterpolatorType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::InterpolatorType

Interpolator types.

Definition at line 89 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef Superclass::InverseTransformBasePointer itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::InverseTransformBasePointer

InverseTransform type.

Definition at line 83 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef Superclass::NumberOfParametersType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::NumberOfParametersType
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::ParametersType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::ParametersType

Type of the input parameters.

Definition at line 100 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef ParametersType::ValueType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::ParametersValueType
template<typename TScalar , unsigned int NDimensions>
typedef SmartPointer<Self> itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::Pointer
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::ScalarType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::ScalarType

Scalar type.

Definition at line 97 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef TimeVaryingBSplineVelocityFieldTransform itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::Self

Standard class typedefs.

Definition at line 74 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldTransform<TScalar, NDimensions> itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::Superclass
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType::Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::TimeVaryingVelocityFieldControlPointLatticePointer
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::TimeVaryingVelocityFieldControlPointLatticeType
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType::DirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldDirectionType
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::VelocityFieldInterpolatorType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldIntegratorType
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType::PointType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldPointType
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType::SizeType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldSizeType
template<typename TScalar , unsigned int NDimensions>
typedef VelocityFieldType::SpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldSpacingType
template<typename TScalar , unsigned int NDimensions>
typedef Superclass::VelocityFieldType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldType

Constructor & Destructor Documentation

template<typename TScalar , unsigned int NDimensions>
itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::TimeVaryingBSplineVelocityFieldTransform ( )
protected
template<typename TScalar , unsigned int NDimensions>
virtual itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::~TimeVaryingBSplineVelocityFieldTransform ( )
protectedvirtual
template<typename TScalar , unsigned int NDimensions>
itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::TimeVaryingBSplineVelocityFieldTransform ( const Self )
private

Member Function Documentation

template<typename TScalar , unsigned int NDimensions>
virtual::itk::LightObject::Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::DisplacementFieldTransform< TScalar, NDimensions >.

template<typename TScalar , unsigned int NDimensions>
virtual const char* itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::VelocityFieldTransform< TScalar, NDimensions >.

template<typename TScalar , unsigned int NDimensions>
virtual unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetSplineOrder ( ) const
virtual

Set/Get the spline order.

template<typename TScalar , unsigned int NDimensions>
VelocityFieldType::Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetTimeVaryingVelocityFieldControlPointLattice ( )
inline

Get the time-varying velocity field control point lattice.

Definition at line 128 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

References itk::VelocityFieldTransform< TScalar, NDimensions >::GetModifiableVelocityField().

template<typename TScalar , unsigned int NDimensions>
virtual VelocityFieldDirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetVelocityFieldDirection ( ) const
virtual

Set/Get sampled velocity field direction

template<typename TScalar , unsigned int NDimensions>
virtual VelocityFieldPointType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetVelocityFieldOrigin ( ) const
virtual

Set/Get sampled velocity field origin

template<typename TScalar , unsigned int NDimensions>
virtual VelocityFieldSizeType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetVelocityFieldSize ( ) const
virtual

Set/Get sampled velocity field size

template<typename TScalar , unsigned int NDimensions>
virtual VelocityFieldSpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::GetVelocityFieldSpacing ( ) const
virtual

Set/Get sampled velocity field spacing

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::IntegrateVelocityField ( )
virtual

Trigger the computation of the displacement field by integrating the time-varying velocity field.

Reimplemented from itk::VelocityFieldTransform< TScalar, NDimensions >.

template<typename TScalar , unsigned int NDimensions>
static Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::New ( )
static

New macro for creation of through a Smart Pointer

template<typename TScalar , unsigned int NDimensions>
void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::operator= ( const Self )
private
template<typename TScalar , unsigned int NDimensions>
void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::DisplacementFieldTransform< TScalar, NDimensions >.

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetSplineOrder ( unsigned int  _arg)
virtual

Set/Get the spline order.

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetTimeVaryingVelocityFieldControlPointLattice ( VelocityFieldType fieldLattice)
inlinevirtual

Set the time-varying velocity field control point lattice.

Definition at line 134 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

References itk::VelocityFieldTransform< TScalar, NDimensions >::SetVelocityField().

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetVelocityFieldDirection ( VelocityFieldDirectionType  _arg)
virtual

Set/Get sampled velocity field direction

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetVelocityFieldOrigin ( VelocityFieldPointType  _arg)
virtual

Set/Get sampled velocity field origin

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetVelocityFieldSize ( VelocityFieldSizeType  _arg)
virtual

Set/Get sampled velocity field size

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::SetVelocityFieldSpacing ( VelocityFieldSpacingType  _arg)
virtual

Set/Get sampled velocity field spacing

template<typename TScalar , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::UpdateTransformParameters ( const DerivativeType update,
ScalarType  factor = 1.0 
)
virtual

Update the transform's parameters by the adding values in update to current parameter values. We assume update is of the same length as Parameters. Throw exception otherwise. factor is a scalar multiplier for each value in update. SetParameters is called at the end of this method, to allow transforms to perform any required operations on the update parameters, typically a converion to member variables for use in TransformPoint.

Reimplemented from itk::VelocityFieldTransform< TScalar, NDimensions >.

Member Data Documentation

template<typename TScalar , unsigned int NDimensions>
const unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::Dimension = NDimensions
static

Dimension of the domain spaces.

Definition at line 108 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

template<typename TScalar , unsigned int NDimensions>
unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_SplineOrder
private
template<typename TScalar , unsigned int NDimensions>
bool itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_TemporalPeriodicity
private
template<typename TScalar , unsigned int NDimensions>
VelocityFieldDirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_VelocityFieldDirection
private
template<typename TScalar , unsigned int NDimensions>
VelocityFieldPointType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_VelocityFieldOrigin
private
template<typename TScalar , unsigned int NDimensions>
VelocityFieldSizeType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_VelocityFieldSize
private
template<typename TScalar , unsigned int NDimensions>
VelocityFieldSpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::m_VelocityFieldSpacing
private
template<typename TScalar , unsigned int NDimensions>
const unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TScalar, NDimensions >::VelocityFieldDimension = NDimensions + 1
static

Dimension of the time varying velocity field.

Definition at line 111 of file itkTimeVaryingBSplineVelocityFieldTransform.h.


The documentation for this class was generated from the following file: