ITK  4.6.0
Insight Segmentation and Registration Toolkit
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itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage > Class Template Reference

#include <itkTestingExtractSliceImageFilter.h>

+ Inheritance diagram for itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >:
+ Collaboration diagram for itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >:

Detailed Description

template<typename TInputImage, typename TOutputImage>
class itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >

Decrease the image size by cropping the image to the selected region bounds.

ExtractSliceImageFilter changes the image boundary of an image by removing pixels outside the target region. The target region must be specified.

ExtractSliceImageFilter also collapses dimensions so that the input image may have more dimensions than the output image (i.e. 4-D input image to a 3-D output image). To specify what dimensions to collapse, the ExtractionRegion must be specified. For any dimension dim where ExtractionRegion.Size[dim] = 0, that dimension is collapsed. The index to collapse on is specified by ExtractionRegion.Index[dim]. For example, we have a image 4D = a 4x4x4x4 image, and we want to get a 3D image, 3D = a 4x4x4 image, specified as [x,y,z,2] from 4D (i.e. the 3rd "time" slice from 4D). The ExtractionRegion.Size = [4,4,4,0] and ExtractionRegion.Index = [0,0,0,2].

The number of dimension in ExtractionRegion.Size and Index must = InputImageDimension. The number of non-zero dimensions in ExtractionRegion.Size must = OutputImageDimension.

The output image produced by this filter will have the same origin as the input image, while the ImageRegion of the output image will start at the starting index value provided in the ExtractRegion parameter. If you are looking for a filter that will re-compute the origin of the output image, and provide an output image region whose index is set to zeros, then you may want to use the RegionOfInterestImageFilter. The output spacing is is simply the collapsed version of the input spacing.

Determining the direction of the collapsed output image from an larger dimensional input space is an ill defined problem in general. It is required that the application developer select the desired transformation strategy for collapsing direction cosigns. It is REQUIRED that a strategy be explicitly requested (i.e. there is no working default). Direction Collapsing Strategies: 1) DirectionCollapseToUnknown(); This is the default and the filter can not run when this is set. The reason is to explicitly force the application developer to define their desired behavior. 1) DirectionCollapseToIdentity(); Output has identity direction no matter what 2) DirectionCollaspeToSubmatrix(); Output direction is the sub-matrix if it is positive definite, else throw an exception.

This filter is implemented as a multithreaded filter. It provides a ThreadedGenerateData() method for its implementation.

See Also
CropImageFilter

Definition at line 83 of file itkTestingExtractSliceImageFilter.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef enum
itk::Testing::ExtractSliceImageFilter::DirectionCollaspeStrategyEnum 
DIRECTIONCOLLAPSESTRATEGY
 
enum  DirectionCollaspeStrategyEnum {
  DIRECTIONCOLLAPSETOUNKOWN =0,
  DIRECTIONCOLLAPSETOIDENTITY =1,
  DIRECTIONCOLLAPSETOSUBMATRIX =2,
  DIRECTIONCOLLAPSETOGUESS =3
}
 
typedef
ImageToImageFilterDetail::ExtractImageFilterRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 
ExtractSliceImageFilterRegionCopierType
 
typedef TInputImage::IndexType InputImageIndexType
 
typedef TInputImage::PixelType InputImagePixelType
 
typedef TInputImage::RegionType InputImageRegionType
 
typedef TInputImage::SizeType InputImageSizeType
 
typedef TInputImage InputImageType
 
typedef TOutputImage::IndexType OutputImageIndexType
 
typedef TOutputImage::PixelType OutputImagePixelType
 
typedef TOutputImage::RegionType OutputImageRegionType
 
typedef TOutputImage::SizeType OutputImageSizeType
 
typedef TOutputImage OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ExtractSliceImageFilter Self
 
typedef ImageSource< TOutputImage > Superclass
 
- Public Types inherited from itk::ImageSource< TOutputImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef OutputImageType::PixelType OutputImagePixelType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef OutputImageType::RegionType OutputImageRegionType
 
typedef TOutputImage OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ImageSource Self
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual const char * GetNameOfClass () const
 
 typedef (Concept::Convertible< InputImagePixelType, OutputImagePixelType >) InputCovertibleToOutputCheck
 
void SetExtractionRegion (InputImageRegionType extractRegion)
 
virtual InputImageRegionType GetExtractionRegion () const
 
virtual void SetInput (const TInputImage *image)
 
const TInputImage * GetInput (void) const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
OutputImageTypeGetOutput (void)
 
const OutputImageTypeGetOutput (void) const
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) ITK_OVERRIDE
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
NameArray GetInputNames () const
 
MultiThreader * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArray GetOutputs ()
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
void SetProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const ITK_OVERRIDE
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) ITK_OVERRIDE
 
virtual void UnRegister () const ITK_OVERRIDE
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ExtractSliceImageFilter ()
 
virtual void GenerateOutputInformation ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
 ~ExtractSliceImageFilter ()
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual void GenerateData () ITK_OVERRIDE
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter (void) const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual ~ImageSource ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
virtual void AddOutput (DataObject *output)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void VerifyInputInformation ()
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject ()
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PopBackInput ()
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void PopFrontInput ()
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

InputImageRegionType m_ExtractionRegion
 
OutputImageRegionType m_OutputImageRegion
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
InternalReferenceCountType m_ReferenceCount
 
SimpleFastMutexLock m_ReferenceCountLock
 

Private Member Functions

 ExtractSliceImageFilter (const Self &)
 
void operator= (const Self &)
 

Private Attributes

DIRECTIONCOLLAPSESTRATEGY m_DirectionCollaspeStrategy
 
static const unsigned int InputImageDimension = TInputImage::ImageDimension
 
static const unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
void SetDirectionCollapseToStrategy (const DIRECTIONCOLLAPSESTRATEGY choosenStrategy)
 
DIRECTIONCOLLAPSESTRATEGY GetDirectionCollapseToStrategy () const
 
void SetDirectionCollapseToGuess ()
 
void SetDirectionCollapseToIdentity ()
 
void SetDirectionCollapseToSubmatrix ()
 

Additional Inherited Members

- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static const unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 

Member Typedef Documentation

template<typename TInputImage , typename TOutputImage >
typedef SmartPointer< const Self > itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::ConstPointer

Definition at line 91 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef enum itk::Testing::ExtractSliceImageFilter::DirectionCollaspeStrategyEnum itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::DIRECTIONCOLLAPSESTRATEGY
template<typename TInputImage , typename TOutputImage >
typedef ImageToImageFilterDetail::ExtractImageFilterRegionCopier< itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) > itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::ExtractSliceImageFilterRegionCopierType

Definition at line 208 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TInputImage::IndexType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImageIndexType

Definition at line 113 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TInputImage::PixelType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImagePixelType

Definition at line 109 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TInputImage::RegionType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImageRegionType

Definition at line 105 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TInputImage::SizeType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImageSizeType

Definition at line 115 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TInputImage itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImageType

Image type information.

Definition at line 97 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TOutputImage::IndexType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImageIndexType

Typedef to describe the output and input image index and size types.

Definition at line 112 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TOutputImage::PixelType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImagePixelType

Typedef to describe the type of pixel.

Definition at line 108 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TOutputImage::RegionType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImageRegionType

Typedef to describe the output and input image region types.

Definition at line 104 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TOutputImage::SizeType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImageSizeType

Definition at line 114 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef TOutputImage itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImageType

Definition at line 101 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef SmartPointer< Self > itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::Pointer

Definition at line 90 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef ExtractSliceImageFilter itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::Self

Standard class typedefs.

Definition at line 88 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
typedef ImageSource< TOutputImage > itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::Superclass

Definition at line 89 of file itkTestingExtractSliceImageFilter.h.

Member Enumeration Documentation

template<typename TInputImage , typename TOutputImage >
enum itk::Testing::ExtractSliceImageFilter::DirectionCollaspeStrategyEnum
Enumerator
DIRECTIONCOLLAPSETOUNKOWN 
DIRECTIONCOLLAPSETOIDENTITY 
DIRECTIONCOLLAPSETOSUBMATRIX 
DIRECTIONCOLLAPSETOGUESS 

Definition at line 117 of file itkTestingExtractSliceImageFilter.h.

Constructor & Destructor Documentation

template<typename TInputImage , typename TOutputImage >
itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::ExtractSliceImageFilter ( )
protected
template<typename TInputImage , typename TOutputImage >
itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::~ExtractSliceImageFilter ( )
inlineprotected

Definition at line 234 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::ExtractSliceImageFilter ( const Self )
private

Member Function Documentation

template<typename TInputImage , typename TOutputImage >
virtual void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::CallCopyOutputRegionToInputRegion ( InputImageRegionType destRegion,
const OutputImageRegionType srcRegion 
)
protectedvirtual

This function calls the actual region copier to do the mapping from output image space to input image space. It uses a Function object used for dispatching to various routines to copy an output region (start index and size) to an input region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::ExtractSliceImageFilter can support output images of a lower dimension that the input.

template<typename TInputImage , typename TOutputImage >
virtual::itk::LightObject::Pointer itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TInputImage , typename TOutputImage >
virtual void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::GenerateOutputInformation ( )
protectedvirtual

ExtractSliceImageFilter can produce an image which is a different resolution than its input image. As such, ExtractSliceImageFilter needs to provide an implementation for GenerateOutputInformation() in order to inform the pipeline execution model. The original documentation of this method is below.

See Also
ProcessObject::GenerateOutputInformaton()

Reimplemented from itk::ProcessObject.

template<typename TInputImage , typename TOutputImage >
DIRECTIONCOLLAPSESTRATEGY itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::GetDirectionCollapseToStrategy ( ) const
inline

NOTE: The SetDirectionCollapseToUknown is explicitly not defined. It is a state that a filter can be in only when it is first instantiate prior to being initialized. Get the currently set strategy for collapsing directions of physical space.

Definition at line 175 of file itkTestingExtractSliceImageFilter.h.

References itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::m_DirectionCollaspeStrategy.

template<typename TInputImage , typename TOutputImage >
virtual InputImageRegionType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::GetExtractionRegion ( ) const
virtual

Set/Get the output image region. If any of the ExtractionRegion.Size = 0 for any particular dimension dim, we have to collapse dimension dim. This means the output image will have 'c' dimensions less than the input image, where c = number of ExtractionRegion.Size = 0.

template<typename TInputImage , typename TOutputImage >
const TInputImage* itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::GetInput ( void  ) const
template<typename TInputImage , typename TOutputImage >
virtual const char* itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageSource< TOutputImage >.

template<typename TInputImage , typename TOutputImage >
static Pointer itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::New ( )
static

Method for creation through the object factory.

template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::operator= ( const Self )
private
template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToGuess ( )
inline
template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToIdentity ( )
inline
template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToStrategy ( const DIRECTIONCOLLAPSESTRATEGY  choosenStrategy)
inline

Set the strategy to be used to collapse pysical space dimensions.

itk::itkExtractSliceImageFilter::DIRECTIONCOLLAPSETOIDENTITY Set the strategy so that all collapsed images have an identity direction. Use this strategy when you know that retention of the physical space orientation of the collapsed image is not important.

itk::itkExtractSliceImageFilter::DIRECTIONCOLLAPSETOGUESS Set the strategy so that all collapsed images where output direction is the sub-matrix it it is positive definite, else return identity. This is backwards compatible with ITKv3, but is highly discouraged because the results are difficult to anticipate under differing data scenerios.

itk::itkExtractSliceImageFilter::DIRECTIONCOLLAPSETOSUBMATRIX Set the strategy so that all collapsed images where output direction is the sub-matrix it it is positive definite, else throw an exception. Use this strategy when it is known that properly identified physical space sub-volumes can be reliably extracted from a higher dimensional space. For example when the application programmer knows that a 4D image is 3D+time, and that the 3D sub-space is properly defined.

Definition at line 149 of file itkTestingExtractSliceImageFilter.h.

References itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::DIRECTIONCOLLAPSETOGUESS, itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::DIRECTIONCOLLAPSETOIDENTITY, itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::DIRECTIONCOLLAPSETOSUBMATRIX, itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::DIRECTIONCOLLAPSETOUNKOWN, itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::m_DirectionCollaspeStrategy, and itk::Object::Modified().

Referenced by itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToGuess(), itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToIdentity(), and itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToSubmatrix().

template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToSubmatrix ( )
inline
template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetExtractionRegion ( InputImageRegionType  extractRegion)

Set/Get the output image region. If any of the ExtractionRegion.Size = 0 for any particular dimension dim, we have to collapse dimension dim. This means the output image will have 'c' dimensions less than the input image, where c = number of ExtractionRegion.Size = 0.

template<typename TInputImage , typename TOutputImage >
virtual void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::SetInput ( const TInputImage *  image)
virtual
template<typename TInputImage , typename TOutputImage >
void itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::ThreadedGenerateData ( const OutputImageRegionType outputRegionForThread,
ThreadIdType  threadId 
)
protectedvirtual

ExtractSliceImageFilter can be implemented as a multithreaded filter. Therefore, this implementation provides a ThreadedGenerateData() routine which is called for each processing thread. The output image data is allocated automatically by the superclass prior to calling ThreadedGenerateData(). ThreadedGenerateData can only write to the portion of the output image specified by the parameter "outputRegionForThread"

Reimplemented from itk::ImageSource< TOutputImage >.

template<typename TInputImage , typename TOutputImage >
itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::typedef ( Concept::Convertible< InputImagePixelType, OutputImagePixelType )

This class requires InputCovertibleToOutputCheck in the form of ( Concept::Convertible< InputImagePixelType, OutputImagePixelType > )

Member Data Documentation

template<typename TInputImage , typename TOutputImage >
const unsigned int itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::InputImageDimension = TInputImage::ImageDimension
static

ImageDimension enumeration

Definition at line 201 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
DIRECTIONCOLLAPSESTRATEGY itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::m_DirectionCollaspeStrategy
private
template<typename TInputImage , typename TOutputImage >
InputImageRegionType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::m_ExtractionRegion
protected

Definition at line 270 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
OutputImageRegionType itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::m_OutputImageRegion
protected

Definition at line 272 of file itkTestingExtractSliceImageFilter.h.

template<typename TInputImage , typename TOutputImage >
const unsigned int itk::Testing::ExtractSliceImageFilter< TInputImage, TOutputImage >::OutputImageDimension = TOutputImage::ImageDimension
static

ImageDimension enumeration

Definition at line 203 of file itkTestingExtractSliceImageFilter.h.


The documentation for this class was generated from the following file: