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Public Types | Public Member Functions | Protected Member Functions | Private Attributes | List of all members
itk::Statistics::MixtureModelComponentBase< TSample > Class Template Referenceabstract

#include <itkMixtureModelComponentBase.h>

+ Inheritance diagram for itk::Statistics::MixtureModelComponentBase< TSample >:
+ Collaboration diagram for itk::Statistics::MixtureModelComponentBase< TSample >:

Detailed Description

template<typename TSample>
class itk::Statistics::MixtureModelComponentBase< TSample >

base class for distribution modules that supports analytical way to update the distribution parameters

This class expects that its subclasses (distribution components) should have analytical expressions for updating its paraters using only the measurement vectors and their associated weights.

This class can be considered as a macro class that encapsulates the storage for the weights, model (subclasses of MembershipFunctionBase), and model parameter estimators (implemenation of analytical expressions).

Subclasses of this class should define their own distribution specific membership function. For example, GaussianMixtureModelComponent class defines and creates a GaussianDensityFunction object for that matter. Subclasses should also cast such membership function object to MembershipFunctionBase object. By doing that, users can get pointers to membership functions from different distributional model

See Also
ExpectationMaximizationMixtureModelEstimator

Definition at line 56 of file itkMixtureModelComponentBase.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef
TSample::MeasurementVectorSizeType 
MeasurementVectorSizeType
 
typedef
TSample::MeasurementVectorType 
MeasurementVectorType
 
typedef MembershipFunctionBase
< MeasurementVectorType
MembershipFunctionType
 
typedef Array< double > ParametersType
 
typedef SmartPointer< SelfPointer
 
typedef MixtureModelComponentBase Self
 
typedef Object Superclass
 
typedef Array< double > WeightArrayType
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

void AreParametersModified (bool flag)
 
bool AreParametersModified ()
 
double Evaluate (MeasurementVectorType &measurements)
 
virtual ParametersType GetFullParameters ()
 
MembershipFunctionTypeGetMembershipFunction ()
 
double GetMinimalParametersChange ()
 
virtual const char * GetNameOfClass () const
 
const TSample * GetSample () const
 
double GetWeight (unsigned int index) const
 
virtual const WeightArrayTypeGetWeights () const
 
void SetMinimalParametersChange (double change)
 
virtual void SetParameters (const ParametersType &parameters)
 
virtual void SetSample (const TSample *sample)
 
void SetWeight (unsigned int index, double value)
 
virtual void Update ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual LightObject::Pointer CreateAnother () const ITK_OVERRIDE
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const ITK_OVERRIDE
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) ITK_OVERRIDE
 
virtual void UnRegister () const ITK_OVERRIDE
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Protected Member Functions

virtual void GenerateData ()=0
 
 MixtureModelComponentBase ()
 
virtual void PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE
 
void SetMembershipFunction (MembershipFunctionType *function)
 
virtual ~MixtureModelComponentBase ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Attributes

MembershipFunctionTypem_MembershipFunction
 
double m_MinimalParametersChange
 
ParametersType m_Parameters
 
bool m_ParametersModified
 
const TSample * m_Sample
 
WeightArrayType m_Weights
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 
- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 
- Protected Attributes inherited from itk::LightObject
InternalReferenceCountType m_ReferenceCount
 
SimpleFastMutexLock m_ReferenceCountLock
 

Member Typedef Documentation

template<typename TSample >
typedef SmartPointer< const Self > itk::Statistics::MixtureModelComponentBase< TSample >::ConstPointer

Definition at line 64 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef TSample::MeasurementVectorSizeType itk::Statistics::MixtureModelComponentBase< TSample >::MeasurementVectorSizeType

Definition at line 70 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef TSample::MeasurementVectorType itk::Statistics::MixtureModelComponentBase< TSample >::MeasurementVectorType

Definition at line 67 of file itkMixtureModelComponentBase.h.

typedef for the MembershipFunctionBase

Definition at line 74 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef Array< double > itk::Statistics::MixtureModelComponentBase< TSample >::ParametersType

Definition at line 79 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef SmartPointer< Self > itk::Statistics::MixtureModelComponentBase< TSample >::Pointer

Definition at line 63 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef MixtureModelComponentBase itk::Statistics::MixtureModelComponentBase< TSample >::Self

Standard class typedefs.

Definition at line 61 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef Object itk::Statistics::MixtureModelComponentBase< TSample >::Superclass

Definition at line 62 of file itkMixtureModelComponentBase.h.

template<typename TSample >
typedef Array< double > itk::Statistics::MixtureModelComponentBase< TSample >::WeightArrayType

typedef of strorage for the weights

Definition at line 77 of file itkMixtureModelComponentBase.h.

Constructor & Destructor Documentation

template<typename TSample >
itk::Statistics::MixtureModelComponentBase< TSample >::MixtureModelComponentBase ( )
protected
template<typename TSample >
virtual itk::Statistics::MixtureModelComponentBase< TSample >::~MixtureModelComponentBase ( )
protectedvirtual

Member Function Documentation

template<typename TSample >
void itk::Statistics::MixtureModelComponentBase< TSample >::AreParametersModified ( bool  flag)

sets the parameters modified tag. if one or more of the membership funtion's parameters are changed, then flag should be true

template<typename TSample >
bool itk::Statistics::MixtureModelComponentBase< TSample >::AreParametersModified ( )

returns the value of parameter modified tag

template<typename TSample >
double itk::Statistics::MixtureModelComponentBase< TSample >::Evaluate ( MeasurementVectorType measurements)

returns the membership score of the "measurements" vector

template<typename TSample >
virtual void itk::Statistics::MixtureModelComponentBase< TSample >::GenerateData ( )
protectedpure virtual
template<typename TSample >
virtual ParametersType itk::Statistics::MixtureModelComponentBase< TSample >::GetFullParameters ( )
inlinevirtual
template<typename TSample >
MembershipFunctionType* itk::Statistics::MixtureModelComponentBase< TSample >::GetMembershipFunction ( )

returns the pointer to the membership function object. Subclasses of this class are responsible for creating the actual membership function objects and cast them to MembershipFunctionBase objects

template<typename TSample >
double itk::Statistics::MixtureModelComponentBase< TSample >::GetMinimalParametersChange ( )
inline
template<typename TSample >
virtual const char* itk::Statistics::MixtureModelComponentBase< TSample >::GetNameOfClass ( ) const
virtual

Standard Macros

Reimplemented from itk::Object.

Reimplemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >
const TSample* itk::Statistics::MixtureModelComponentBase< TSample >::GetSample ( ) const

returns the sample pointer

template<typename TSample >
double itk::Statistics::MixtureModelComponentBase< TSample >::GetWeight ( unsigned int  index) const

returns the index-th weight

template<typename TSample >
virtual const WeightArrayType& itk::Statistics::MixtureModelComponentBase< TSample >::GetWeights ( ) const
virtual

returns the pointer to the weights array

template<typename TSample >
virtual void itk::Statistics::MixtureModelComponentBase< TSample >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

Reimplemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >
void itk::Statistics::MixtureModelComponentBase< TSample >::SetMembershipFunction ( MembershipFunctionType function)
protected

stores the pointer to the membership function. subclasses use this function to store their membership function object after dynamic creation

template<typename TSample >
void itk::Statistics::MixtureModelComponentBase< TSample >::SetMinimalParametersChange ( double  change)
inline
template<typename TSample >
virtual void itk::Statistics::MixtureModelComponentBase< TSample >::SetParameters ( const ParametersType parameters)
virtual
template<typename TSample >
virtual void itk::Statistics::MixtureModelComponentBase< TSample >::SetSample ( const TSample *  sample)
virtual

stores the sample pointer

Reimplemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >
void itk::Statistics::MixtureModelComponentBase< TSample >::SetWeight ( unsigned int  index,
double  value 
)

sets the index-th weight with the "value"

template<typename TSample >
virtual void itk::Statistics::MixtureModelComponentBase< TSample >::Update ( )
virtual

Member Data Documentation

template<typename TSample >
MembershipFunctionType* itk::Statistics::MixtureModelComponentBase< TSample >::m_MembershipFunction
private

SmartPointer to the memberhip function - usually density function

Definition at line 152 of file itkMixtureModelComponentBase.h.

template<typename TSample >
double itk::Statistics::MixtureModelComponentBase< TSample >::m_MinimalParametersChange
private
template<typename TSample >
ParametersType itk::Statistics::MixtureModelComponentBase< TSample >::m_Parameters
private
template<typename TSample >
bool itk::Statistics::MixtureModelComponentBase< TSample >::m_ParametersModified
private

indicative flag of membership function's parameter changes

Definition at line 158 of file itkMixtureModelComponentBase.h.

template<typename TSample >
const TSample* itk::Statistics::MixtureModelComponentBase< TSample >::m_Sample
private

target sample data pointer

Definition at line 145 of file itkMixtureModelComponentBase.h.

template<typename TSample >
WeightArrayType itk::Statistics::MixtureModelComponentBase< TSample >::m_Weights
private

weights array

Definition at line 155 of file itkMixtureModelComponentBase.h.


The documentation for this class was generated from the following file: