ITK  4.13.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | List of all members
itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField > Class Template Reference

#include <itkSymmetricForcesDemonsRegistrationFilter.h>

+ Inheritance diagram for itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:
+ Collaboration diagram for itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using the demons algorithm.

This class was contributed by Corinne Mattmann, ETH Zurich, Switzerland. based on a variation of the DemonsRegistrationFilter. The basic modification is to use equation (5) from Thirion's paper along with the modification for avoiding large deformations when gradients have small values.

SymmetricForcesDemonsRegistrationFilter implements the demons deformable algorithm that register two images by computing the deformation field which will map a moving image onto a fixed image.

A deformation field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the deformation field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial deformation field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The algorithm has one parameters: the number of iteration to be performed.

The output deformation field can be obtained via methods GetOutput or GetDisplacementField.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed in DemonsRegistrationFunction.

Warning
This filter assumes that the fixed image type, moving image type and deformation field type all have the same number of dimensions.
See Also
SymmetricForcesDemonsRegistrationFunction
DemonsRegistrationFilter
DemonsRegistrationFunction
Examples:
Examples/RegistrationITKv3/DeformableRegistration17.cxx, Examples/RegistrationITKv3/DeformableRegistration3.cxx, Examples/RegistrationITKv4/DeformableRegistration17.cxx, and Examples/RegistrationITKv4/DeformableRegistration3.cxx.

Definition at line 70 of file itkSymmetricForcesDemonsRegistrationFilter.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef
SymmetricForcesDemonsRegistrationFunction
< FixedImageType,
MovingImageType,
DisplacementFieldType
DemonsRegistrationFunctionType
 
typedef
Superclass::DisplacementFieldPointer 
DisplacementFieldPointer
 
typedef
Superclass::DisplacementFieldType 
DisplacementFieldType
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef
Superclass::FixedImagePointer 
FixedImagePointer
 
typedef Superclass::FixedImageType FixedImageType
 
typedef
Superclass::MovingImagePointer 
MovingImagePointer
 
typedef Superclass::MovingImageType MovingImageType
 
typedef SmartPointer< SelfPointer
 
typedef
SymmetricForcesDemonsRegistrationFilter 
Self
 
typedef
PDEDeformableRegistrationFilter
< TFixedImage, TMovingImage,
TDisplacementField > 
Superclass
 
typedef
FiniteDifferenceFunctionType::TimeStepType 
TimeStepType
 
- Public Types inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef TDisplacementField DisplacementFieldType
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef
FixedImageType::ConstPointer 
FixedImageConstPointer
 
typedef FixedImageType::Pointer FixedImagePointer
 
typedef TFixedImage FixedImageType
 
typedef
MovingImageType::ConstPointer 
MovingImageConstPointer
 
typedef MovingImageType::Pointer MovingImagePointer
 
typedef TMovingImage MovingImageType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef
PDEDeformableRegistrationFunction
< FixedImageType,
MovingImageType,
DisplacementFieldType
PDEDeformableRegistrationFunctionType
 
typedef SmartPointer< SelfPointer
 
typedef
PDEDeformableRegistrationFilter 
Self
 
typedef FixedArray< double,
ImageDimension
StandardDeviationsType
 
typedef
DenseFiniteDifferenceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
- Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef Superclass::InputImageType InputImageType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef Superclass::PixelType PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
DenseFiniteDifferenceImageFilter 
Self
 
typedef
FiniteDifferenceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
typedef Superclass::TimeStepType TimeStepType
 
typedef OutputImageType UpdateBufferType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
FiniteDifferenceFunction
< TDisplacementField > 
FiniteDifferenceFunctionType
 
typedef TDisplacementField InputImageType
 
typedef
TDisplacementField::PixelType 
InputPixelType
 
typedef NumericTraits
< InputPixelType >::ValueType 
InputPixelValueType
 
typedef
FiniteDifferenceFunctionType::NeighborhoodScalesType 
NeighborhoodScalesType
 
typedef TDisplacementField OutputImageType
 
typedef
TDisplacementField::PixelType 
OutputPixelType
 
typedef NumericTraits
< OutputPixelType >::ValueType 
OutputPixelValueType
 
typedef OutputPixelType PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
FiniteDifferenceFunctionType::RadiusType 
RadiusType
 
typedef FiniteDifferenceImageFilter Self
 
typedef InPlaceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
typedef
FiniteDifferenceFunctionType::TimeStepType 
TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TDisplacementField InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImagePointer 
OutputImagePointer
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef InPlaceImageFilter Self
 
typedef ImageToImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
- Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TDisplacementField InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef SmartPointer< SelfPointer
 
typedef ImageToImageFilter Self
 
typedef ImageSource
< TDisplacementField > 
Superclass
 
- Public Types inherited from itk::ImageSource< TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef OutputImageType::PixelType OutputImagePixelType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef OutputImageType::RegionType OutputImageRegionType
 
typedef TDisplacementField OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ImageSource Self
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef MultiThreader MultiThreaderType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual double GetIntensityDifferenceThreshold () const
 
virtual double GetMetric () const
 
virtual const char * GetNameOfClass () const
 
virtual const double & GetRMSChange () const override
 
virtual void SetIntensityDifferenceThreshold (double)
 
- Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
DisplacementFieldTypeGetDisplacementField ()
 
virtual const FixedImageTypeGetFixedImage () const
 
virtual const
DisplacementFieldType
GetInitialDisplacementField () const
 
virtual const MovingImageTypeGetMovingImage () const
 
virtual std::vector
< SmartPointer< DataObject >
>::size_type 
GetNumberOfValidRequiredInputs () const override
 
virtual const
StandardDeviationsType
GetStandardDeviations () const
 
virtual const
StandardDeviationsType
GetUpdateFieldStandardDeviations () const
 
virtual void SetFixedImage (const FixedImageType *input)
 
virtual void SetInitialDisplacementField (const DisplacementFieldType *input)
 
virtual void SetMovingImage (const MovingImageType *input)
 
virtual void StopRegistration ()
 
virtual void SetSmoothDisplacementField (bool _arg)
 
virtual bool GetSmoothDisplacementField () const
 
virtual void SmoothDisplacementFieldOn ()
 
virtual void SmoothDisplacementFieldOff ()
 
virtual void SetStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetStandardDeviations (double value)
 
virtual void SetSmoothUpdateField (bool _arg)
 
virtual bool GetSmoothUpdateField () const
 
virtual void SmoothUpdateFieldOn ()
 
virtual void SmoothUpdateFieldOff ()
 
virtual void SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetUpdateFieldStandardDeviations (double value)
 
virtual void SetMaximumError (double _arg)
 
virtual double GetMaximumError () const
 
virtual void SetMaximumKernelWidth (unsigned int _arg)
 
virtual unsigned int GetMaximumKernelWidth () const
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const
FiniteDifferenceFunctionType::Pointer
GetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual bool GetIsInitialized ()
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetIsInitialized (bool _arg)
 
void SetStateToInitialized ()
 
void SetStateToUninitialized ()
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
virtual void PopBackInput () override
 
virtual void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TDisplacementField *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *output)
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
void SetProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) override
 
virtual void UnRegister () const noexceptoverride
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

virtual void ApplyUpdate (const TimeStepType &dt) override
 
virtual void InitializeIteration () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 SymmetricForcesDemonsRegistrationFilter ()
 
 ~SymmetricForcesDemonsRegistrationFilter () override
 
- Protected Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
virtual void CopyInputToOutput () override
 
virtual void GenerateInputRequestedRegion () override
 
virtual void GenerateOutputInformation () override
 
virtual bool Halt () override
 
virtual void Initialize () override
 
 PDEDeformableRegistrationFilter ()
 
virtual void PostProcessOutput () override
 
virtual void SmoothDisplacementField ()
 
virtual void SmoothUpdateField ()
 
 ~PDEDeformableRegistrationFilter () override
 
- Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void AllocateUpdateBuffer () override
 
virtual void ApplyUpdate (const TimeStepType &dt) override
 
virtual TimeStepType CalculateChange () override
 
 DenseFiniteDifferenceImageFilter ()
 
virtual UpdateBufferTypeGetUpdateBuffer ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
 ~DenseFiniteDifferenceImageFilter () override
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void ApplyUpdate (const TimeStepType &dt)=0
 
 FiniteDifferenceImageFilter ()
 
virtual void GenerateData () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
virtual bool ThreadedHalt (void *)
 
virtual ~FiniteDifferenceImageFilter () override
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual void AllocateOutputs () override
 
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()
 
virtual void ReleaseInputs () override
 
 ~InPlaceImageFilter () override
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
virtual void VerifyInputInformation () override
 
 ~ImageToImageFilter () override
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual ~ImageSource () override
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Additional Inherited Members

- Static Public Attributes inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static const unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static const unsigned int OutputImageDimension
 
- Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef
UpdateBufferType::RegionType 
ThreadRegionType
 
- Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(OutputImageDimension),
itkGetStaticConstMacro(InputImageDimension) > 
InputToOutputRegionCopierType
 
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 
OutputToInputRegionCopierType
 
- Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
IdentifierType m_ElapsedIterations
 
bool m_IsInitialized
 
bool m_ManualReinitialization
 
double m_MaximumRMSError
 
IdentifierType m_NumberOfIterations
 
double m_RMSChange
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
AtomicInt< int > m_ReferenceCount
 

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SmartPointer< const Self > itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer

Definition at line 79 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SymmetricForcesDemonsRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType > itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFunctionType

DemonsRegistrationFilterFunction type.

Definition at line 111 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::DisplacementFieldPointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldPointer
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::DisplacementFieldType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType

Deformation field type.

Definition at line 98 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FiniteDifferenceFunctionType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FiniteDifferenceFunctionType
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FixedImagePointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer

Definition at line 90 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FixedImageType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType

FixedImage image type.

Definition at line 86 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::MovingImagePointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer

Definition at line 94 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::MovingImageType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType

MovingImage image type.

Definition at line 93 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SmartPointer< Self > itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Pointer

Definition at line 78 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SymmetricForcesDemonsRegistrationFilter itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Self

Standard class typedefs.

Definition at line 76 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField > itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Superclass

Definition at line 77 of file itkSymmetricForcesDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef FiniteDifferenceFunctionType::TimeStepType itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::TimeStepType

Take timestep type from the FiniteDifferenceFunction.

Definition at line 107 of file itkSymmetricForcesDemonsRegistrationFilter.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SymmetricForcesDemonsRegistrationFilter ( )
protected
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::~SymmetricForcesDemonsRegistrationFilter ( )
inlineoverrideprotected

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ApplyUpdate ( const TimeStepType dt)
overrideprotectedvirtual

Apply update.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual::itk::LightObject::Pointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual double itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetIntensityDifferenceThreshold ( ) const
virtual
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual double itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMetric ( ) const
virtual

Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images. This value is calculated for the current iteration

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const char* itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const double& itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetRMSChange ( ) const
overridevirtual

Set/Get the root mean squared change of the previous iteration. May not be used by all solvers.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )
overrideprotectedvirtual

Initialize the state of filter and equation before each iteration.

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
static Pointer itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::New ( )
static

Method for creation through the object factory.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetIntensityDifferenceThreshold ( double  )
virtual

Set/Get the threshold below which the absolute difference of intensity yields a match. When the intensities match between a moving and fixed image pixel, the update vector (for that iteration) will be the zero vector. Default is 0.001.


The documentation for this class was generated from the following file: