ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Types | Protected Member Functions | Private Member Functions | Private Attributes
itk::IntermodesThresholdCalculator< THistogram, TOutput > Class Template Reference
Operators | Module ITKThresholding

#include <itkIntermodesThresholdCalculator.h>

+ Inheritance diagram for itk::IntermodesThresholdCalculator< THistogram, TOutput >:
+ Collaboration diagram for itk::IntermodesThresholdCalculator< THistogram, TOutput >:

List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef THistogram HistogramType
typedef
HistogramType::InstanceIdentifier 		InstanceIdentifier
typedef TOutput OutputType
typedef SmartPointer< Self > Pointer
typedef
IntermodesThresholdCalculator 		Self
typedef Object Superclass

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual SizeValueType GetMaximumSmoothingIterations () const
virtual const char * GetNameOfClass () const
virtual void SetMaximumSmoothingIterations (SizeValueType _arg)
virtual void SetUseInterMode (bool _arg)
virtual bool GetUseInterMode () const

Static Public Member Functions

static Pointer New ()

Protected Types

typedef
HistogramType::AbsoluteFrequencyType 		AbsoluteFrequencyType
typedef
HistogramType::TotalAbsoluteFrequencyType 		TotalAbsoluteFrequencyType

Protected Member Functions

void GenerateData (void)
 IntermodesThresholdCalculator ()
void PrintSelf (std::ostream &os, Indent indent) const
virtual ~IntermodesThresholdCalculator ()

Private Member Functions

bool BimodalTest (const std::vector< double > &h)
 IntermodesThresholdCalculator (const Self &)
void operator= (const Self &)

Private Attributes

SizeValueType m_MaximumSmoothingIterations
bool m_UseInterMode

Detailed Description

template<class THistogram, class TOutput = double>
class itk::IntermodesThresholdCalculator< THistogram, TOutput >

Computes the Intermodes's threshold for an image.

J. M. S. Prewitt and M. L. Mendelsohn, "The analysis of cell images," in Annals of the New York Academy of Sciences, vol. 128, pp. 1035-1053, 1966. * Assumes a bimodal histogram. The histogram needs is smoothed (using a running average of size 3, iteratively) until there are only two local maxima. j and k Threshold t is (j+k)/2. Images with histograms having extremely unequal peaks or a broad and flat valley are unsuitable for this method.

This class is templated over the input histogram type.

Warning:
This calculator assumes that the input histogram has only one dimension.
Author:
Richard Beare. Department of Medicine, Monash University, Melbourne, Australia.
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/10380/3279 or http://www.insight-journal.org/browse/publication/811

Definition at line 56 of file itkIntermodesThresholdCalculator.h.

Member Typedef Documentation

template<class THistogram , class TOutput = double>
typedef HistogramType::AbsoluteFrequencyType itk::IntermodesThresholdCalculator< THistogram, TOutput >::AbsoluteFrequencyType [protected]

Definition at line 99 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef SmartPointer<const Self> itk::IntermodesThresholdCalculator< THistogram, TOutput >::ConstPointer

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 63 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef THistogram itk::IntermodesThresholdCalculator< THistogram, TOutput >::HistogramType

Type definition for the input image.

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 69 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef HistogramType::InstanceIdentifier itk::IntermodesThresholdCalculator< THistogram, TOutput >::InstanceIdentifier

Definition at line 75 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef TOutput itk::IntermodesThresholdCalculator< THistogram, TOutput >::OutputType

output object type

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 73 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef SmartPointer<Self> itk::IntermodesThresholdCalculator< THistogram, TOutput >::Pointer

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 62 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef IntermodesThresholdCalculator itk::IntermodesThresholdCalculator< THistogram, TOutput >::Self

Standard class typedefs.

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 60 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef Object itk::IntermodesThresholdCalculator< THistogram, TOutput >::Superclass

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

Definition at line 61 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
typedef HistogramType::TotalAbsoluteFrequencyType itk::IntermodesThresholdCalculator< THistogram, TOutput >::TotalAbsoluteFrequencyType [protected]

Definition at line 98 of file itkIntermodesThresholdCalculator.h.

Constructor & Destructor Documentation

template<class THistogram , class TOutput = double>
itk::IntermodesThresholdCalculator< THistogram, TOutput >::IntermodesThresholdCalculator ( ) [inline, protected]

Definition at line 87 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
virtual itk::IntermodesThresholdCalculator< THistogram, TOutput >::~IntermodesThresholdCalculator ( ) [inline, protected, virtual]

Definition at line 93 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
itk::IntermodesThresholdCalculator< THistogram, TOutput >::IntermodesThresholdCalculator ( const Self &  ) [private]

Member Function Documentation

template<class THistogram , class TOutput = double>
bool itk::IntermodesThresholdCalculator< THistogram, TOutput >::BimodalTest ( const std::vector< double > &  h) [private]
template<class THistogram , class TOutput = double>
virtual::itk::LightObject::Pointer itk::IntermodesThresholdCalculator< THistogram, TOutput >::CreateAnother ( void  ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

template<class THistogram , class TOutput = double>
void itk::IntermodesThresholdCalculator< THistogram, TOutput >::GenerateData ( void  ) [protected, virtual]

This method causes the filter to generate its output.

Reimplemented from itk::ProcessObject.

template<class THistogram , class TOutput = double>
virtual SizeValueType itk::IntermodesThresholdCalculator< THistogram, TOutput >::GetMaximumSmoothingIterations ( ) const [virtual]
template<class THistogram , class TOutput = double>
virtual const char* itk::IntermodesThresholdCalculator< THistogram, TOutput >::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

template<class THistogram , class TOutput = double>
virtual bool itk::IntermodesThresholdCalculator< THistogram, TOutput >::GetUseInterMode ( ) const [virtual]

select whether midpoint (intermode=true) or minimum between peaks is used

template<class THistogram , class TOutput = double>
static Pointer itk::IntermodesThresholdCalculator< THistogram, TOutput >::New ( ) [static]

Method for creation through the object factory.

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

template<class THistogram , class TOutput = double>
void itk::IntermodesThresholdCalculator< THistogram, TOutput >::operator= ( const Self &  ) [private]

Time when GenerateOutputInformation was last called.

Reimplemented from itk::HistogramThresholdCalculator< THistogram, TOutput >.

template<class THistogram , class TOutput = double>
void itk::IntermodesThresholdCalculator< THistogram, TOutput >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

template<class THistogram , class TOutput = double>
virtual void itk::IntermodesThresholdCalculator< THistogram, TOutput >::SetMaximumSmoothingIterations ( SizeValueType  _arg) [virtual]
template<class THistogram , class TOutput = double>
virtual void itk::IntermodesThresholdCalculator< THistogram, TOutput >::SetUseInterMode ( bool  _arg) [virtual]

select whether midpoint (intermode=true) or minimum between peaks is used

Member Data Documentation

template<class THistogram , class TOutput = double>
SizeValueType itk::IntermodesThresholdCalculator< THistogram, TOutput >::m_MaximumSmoothingIterations [private]

Definition at line 106 of file itkIntermodesThresholdCalculator.h.

template<class THistogram , class TOutput = double>
bool itk::IntermodesThresholdCalculator< THistogram, TOutput >::m_UseInterMode [private]

Definition at line 107 of file itkIntermodesThresholdCalculator.h.

The documentation for this class was generated from the following file:
Generated on Tue May 22 2012 01:03:50 for ITK by doxygen 1.7.6.1