#include <itkImageRegistrationMethodv4.h>

Inheritance diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >:

Collaboration diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >:

Public Types
typedef CompositeTransformType::Pointer	CompositeTransformPointer
typedef CompositeTransform < RealType, ImageDimension >	CompositeTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef ProcessObject::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef DecoratedOutputTransformType::Pointer	DecoratedOutputTransformPointer
typedef DataObjectDecorator < OutputTransformType >	DecoratedOutputTransformType
typedef OutputTransformType::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef FixedImageType::Pointer	FixedImagePointer
typedef TFixedImage	FixedImageType
typedef FixedInterpolatorType::Pointer	FixedInterpolatorPointer
typedef InterpolateImageFunction < FixedImageType, RealType >	FixedInterpolatorType
typedef InitialTransformType::Pointer	InitialTransformPointer
typedef Transform< RealType, ImageDimension, ImageDimension >	InitialTransformType
typedef MetricType::Pointer	MetricPointer
typedef MetricType::FixedSampledPointSetType	MetricSamplePointSetType
enum	MetricSamplingStrategyType { NONE, REGULAR, RANDOM }
typedef ImageToImageMetricv4 < FixedImageType, MovingImageType >	MetricType
typedef MovingImageType::Pointer	MovingImagePointer
typedef TMovingImage	MovingImageType
typedef MovingInterpolatorType::Pointer	MovingInterpolatorPointer
typedef InterpolateImageFunction < MovingImageType, RealType >	MovingInterpolatorType
typedef OptimizerType::Pointer	OptimizerPointer
typedef ObjectToObjectOptimizerBase	OptimizerType
typedef OutputTransformType::Pointer	OutputTransformPointer
typedef TOutputTransform	OutputTransformType
typedef SmartPointer< Self >	Pointer
typedef OutputTransformType::ScalarType	RealType
typedef ImageRegistrationMethodv4	Self
typedef Array< SizeValueType >	ShrinkFactorsArrayType
typedef Array< RealType >	SmoothingSigmasArrayType
typedef ProcessObject	Superclass
typedef TransformParametersAdaptorType::Pointer	TransformParametersAdaptorPointer
typedef std::vector < TransformParametersAdaptorPointer >	TransformParametersAdaptorsContainerType
typedef TransformParametersAdaptor < OutputTransformType >	TransformParametersAdaptorType
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const RealType &	GetCurrentConvergenceValue ()
virtual const SizeValueType &	GetCurrentIteration ()
virtual SizeValueType	GetCurrentLevel () const
virtual const RealType &	GetCurrentMetricValue ()
virtual const bool &	GetIsConverged ()
virtual const char *	GetNameOfClass () const
virtual const DecoratedOutputTransformType *	GetOutput () const
virtual DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType)
void	StartRegistration ()

virtual void	SetFixedImage (const FixedImageType *input)
virtual const FixedImageType *	GetFixedImage () const

virtual void	SetMovingImage (const MovingImageType *input)
virtual const MovingImageType *	GetMovingImage () const

virtual void	SetFixedInitialTransform (InitialTransformType *_arg)
virtual const InitialTransformType *	GetFixedInitialTransform ()

virtual void	SetMovingInitialTransform (InitialTransformType *_arg)
virtual const InitialTransformType *	GetMovingInitialTransform ()

virtual void	SetFixedInterpolator (FixedInterpolatorType *_arg)
virtual const FixedInterpolatorType *	GetFixedInterpolator ()

virtual void	SetMovingInterpolator (MovingInterpolatorType *_arg)
virtual const MovingInterpolatorType *	GetMovingInterpolator ()

virtual void	SetMetric (MetricType *_arg)
virtual MetricType *	GetMetric ()

virtual void	SetMetricSamplingStrategy (MetricSamplingStrategyType _arg)
virtual MetricSamplingStrategyType	GetMetricSamplingStrategy () const

virtual void	SetMetricSamplingPercentage (RealType _arg)
virtual RealType	GetMetricSamplingPercentage () const

virtual void	SetOptimizer (OptimizerType *_arg)
virtual OptimizerType *	GetOptimizer ()

void	SetTransformParametersAdaptorsPerLevel (TransformParametersAdaptorsContainerType &)
const TransformParametersAdaptorsContainerType &	GetTransformParametersAdaptorsPerLevel () const

void	SetNumberOfLevels (const SizeValueType)
virtual SizeValueType	GetNumberOfLevels () const

virtual void	SetShrinkFactorsPerLevel (ShrinkFactorsArrayType _arg)
virtual ShrinkFactorsArrayType	GetShrinkFactorsPerLevel () const

virtual void	SetSmoothingSigmasPerLevel (SmoothingSigmasArrayType _arg)
virtual SmoothingSigmasArrayType	GetSmoothingSigmasPerLevel () const
Static Public Member Functions
static Pointer	New ()
Static Public Attributes
static const unsigned int	ImageDimension = TFixedImage::ImageDimension
Protected Member Functions
virtual void	GenerateData ()
	ImageRegistrationMethodv4 ()
virtual void	InitializeRegistrationAtEachLevel (const SizeValueType)
virtual void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	SetMetricSamplePoints ()
virtual	~ImageRegistrationMethodv4 ()
Protected Attributes
CompositeTransformPointer	m_CompositeTransform
RealType	m_CurrentConvergenceValue
SizeValueType	m_CurrentIteration
SizeValueType	m_CurrentLevel
RealType	m_CurrentMetricValue
InitialTransformPointer	m_FixedInitialTransform
FixedInterpolatorPointer	m_FixedInterpolator
FixedImagePointer	m_FixedSmoothImage
bool	m_IsConverged
MetricPointer	m_Metric
RealType	m_MetricSamplingPercentage
MetricSamplingStrategyType	m_MetricSamplingStrategy
InitialTransformPointer	m_MovingInitialTransform
MovingInterpolatorPointer	m_MovingInterpolator
MovingImagePointer	m_MovingSmoothImage
SizeValueType	m_NumberOfLevels
OptimizerPointer	m_Optimizer
OutputTransformPointer	m_OutputTransform
ShrinkFactorsArrayType	m_ShrinkFactorsPerLevel
SmoothingSigmasArrayType	m_SmoothingSigmasPerLevel
TransformParametersAdaptorsContainerType	m_TransformParametersAdaptorsPerLevel
Private Member Functions
	ImageRegistrationMethodv4 (const Self &)
void	operator= (const Self &)

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>
class itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >

Interface method for the current registration framework.

This interface method class encapsulates typical registration usage by incorporating all the necessary elements for performing a simple image registration between two images. This method also allows for multistage registration whereby each stage is characterize by possibly different transforms of and different image metrics. For example, many users will want to perform a linear registration followed by deformable registration where both stages are performed in multiple levels. Each level can be characterized by:

the resolution of the virtual domain image (see below)
smoothing of the fixed and moving images
the coarseness of the current transform via transform adaptors (see below)

Multiple stages are handled by linking multiple instantiations of this class where the output transform is added to the optional composite transform input.

Transform adaptors: To accommodate new changes to the current ITK registration framework, we introduced the concept of transform adaptors. Whereas each stage is associated with a moving and, possibly, fixed transform, each level of each stage is defined by a transform adaptor which describes how to adapt the transform to the current level. For example, if one were to use the B-spline transform during a deformable registration stage, common practice is to increase the resolution of the B-spline mesh (or, analogously, the control point grid size) at each level. At each level, one would define the parameters of the B-spline transform adaptor at that level which increases the resolution from the previous level. For many transforms, such as affine, this concept of an adaptor may be nonsensical. For this reason, the base transform adaptor class does not do anything to the transform but merely passes it through. Each level of each stage must define a transform adaptor but, by default, the base adaptor class is assigned which, again, does not do anything to the transform. A special mention should be made of the transform adaptor at level 0 of any stage. Most likely, the user will not want to do anything to the transform as it enters into the given stage so typical use will be to assign the base adaptor class to level 0 of all stages but we leave that open to the user.

Output: The output is the updated transform which has been added to the composite transform.

Author:: Nick Tustison; Brian Avants

Definition at line 90 of file itkImageRegistrationMethodv4.h.

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef CompositeTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CompositeTransformPointer

Definition at line 129 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef CompositeTransform<RealType, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CompositeTransformType

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 128 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef SmartPointer<const Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ConstPointer

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 98 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef ProcessObject::DataObjectPointerArraySizeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DataObjectPointerArraySizeType

Make a DataObject of the correct type to be used as the specified output.

Reimplemented from itk::ProcessObject.

Definition at line 250 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef DecoratedOutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DecoratedOutputTransformPointer

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 136 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef DataObjectDecorator<OutputTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DecoratedOutputTransformType

Type for the output: Using Decorator pattern for enabling the transform to be passed in the data pipeline

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 135 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef OutputTransformType::DerivativeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DerivativeType

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 122 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef DerivativeType::ValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DerivativeValueType

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 123 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef FixedImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedImagePointer

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 111 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef TFixedImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedImageType

Input typedefs for the images and transforms.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 107 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef FixedInterpolatorType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedInterpolatorPointer

Definition at line 144 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef InterpolateImageFunction<FixedImageType, RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedInterpolatorType

Interpolator typedefs

Definition at line 143 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef InitialTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitialTransformPointer

Definition at line 126 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef Transform<RealType, ImageDimension, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitialTransformType

Definition at line 125 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef MetricType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricPointer

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 117 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef MetricType::FixedSampledPointSetType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricSamplePointSetType

Definition at line 160 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef ImageToImageMetricv4<FixedImageType, MovingImageType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricType

Metric and transform typedefs

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 116 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef MovingImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingImagePointer

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 113 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef TMovingImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingImageType

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 112 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef MovingInterpolatorType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingInterpolatorPointer

Definition at line 146 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef InterpolateImageFunction<MovingImageType, RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingInterpolatorType

Definition at line 145 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef OptimizerType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OptimizerPointer

Definition at line 155 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef ObjectToObjectOptimizerBase itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OptimizerType

Type of the optimizer.

Definition at line 154 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef OutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OutputTransformPointer

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 120 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef TOutputTransform itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OutputTransformType

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 119 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef SmartPointer<Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Pointer

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 97 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef OutputTransformType::ScalarType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::RealType

Reimplemented in itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 121 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef ImageRegistrationMethodv4 itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Self

Standard class typedefs.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 95 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef Array<SizeValueType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ShrinkFactorsArrayType

array typedef

Definition at line 139 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef Array<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SmoothingSigmasArrayType

Definition at line 140 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef ProcessObject itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Superclass

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 96 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef TransformParametersAdaptorType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorPointer

Definition at line 150 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef std::vector<TransformParametersAdaptorPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorsContainerType

Definition at line 151 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

typedef TransformParametersAdaptor<OutputTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorType

Transform adaptor typedefs

Definition at line 149 of file itkImageRegistrationMethodv4.h.

Member Enumeration Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

enum itk::ImageRegistrationMethodv4::MetricSamplingStrategyType

enum type for metric sampling strategy

Enumerator:

NONE
REGULAR
RANDOM

Definition at line 158 of file itkImageRegistrationMethodv4.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageRegistrationMethodv4 ( ) [protected]

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::~ImageRegistrationMethodv4 ( ) [protected, virtual]

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageRegistrationMethodv4 ( const Self & ) [private]

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual::itk::LightObject::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CreateAnother ( void ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GenerateData ( ) [protected, virtual]

Perform the registration.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentConvergenceValue ( ) [virtual]

Get the current convergence value. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const SizeValueType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentIteration ( ) [virtual]

Get the current iteration. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentLevel ( ) const [virtual]

Get the current level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentMetricValue ( ) [virtual]

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const FixedImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedImage ( ) const [virtual]

Set/Get the fixed image.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedInitialTransform ( ) [virtual]

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const FixedInterpolatorType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedInterpolator ( ) [virtual]

Set/Get the fixed interpolator.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const bool& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetIsConverged ( ) [virtual]

Get the current convergence state per level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual MetricType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetric ( ) [virtual]

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetricSamplingPercentage ( ) const [virtual]

Set/Get the metric sampling percentage.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetricSamplingStrategy ( ) const [virtual]

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const MovingImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingImage ( ) const [virtual]

Set/Get the moving image.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingInitialTransform ( ) [virtual]

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const MovingInterpolatorType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingInterpolator ( ) [virtual]

Set/Get the moving interpolator.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const char* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetNumberOfLevels ( ) const [virtual]

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

shrink factors for the virtual domain
sigma smoothing parameter
transform adaptor with specific parameters for the specified level

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual OptimizerType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetOptimizer ( ) [virtual]

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual const DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetOutput ( ) const [virtual]

Returns the transform resulting from the registration process

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual ShrinkFactorsArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetShrinkFactorsPerLevel ( ) const [virtual]

Set/Get the shrink factors for each level. At each resolution level, the itkShrinkImageFilter is called. For a 256x256 image, a shrink factor of 2 reduces the image to 128x128.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetSmoothingSigmasPerLevel ( ) const [virtual]

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified in physical units.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

const TransformParametersAdaptorsContainerType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetTransformParametersAdaptorsPerLevel ( ) const

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitializeRegistrationAtEachLevel ( const SizeValueType ) [protected, virtual]

Initialize by setting the interconnects between the components.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual DataObjectPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MakeOutput ( DataObjectPointerArraySizeType idx ) [virtual]

Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a itkSmartPointer to a DataObject. ImageSource and MeshSource override this method to create the correct type of image and mesh respectively. If a filter has multiple outputs of different types, then that filter must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

static Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::New ( ) [static]

Method for creation through the object factory.

Reimplemented from itk::Object.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::operator= ( const Self & ) [private]

Time when GenerateOutputInformation was last called.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const `[protected, virtual]`

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedImage ( const FixedImageType * input ) [virtual]

Set/Get the fixed image.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedInitialTransform ( InitialTransformType * _arg ) [virtual]

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedInterpolator ( FixedInterpolatorType * _arg ) [virtual]

Set/Get the fixed interpolator.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetric ( MetricType * _arg ) [virtual]

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplePoints ( ) [protected, virtual]

Get metric samples.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplingPercentage ( RealType _arg ) [virtual]

Set/Get the metric sampling percentage.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplingStrategy ( MetricSamplingStrategyType _arg ) [virtual]

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingImage ( const MovingImageType * input ) [virtual]

Set/Get the moving image.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingInitialTransform ( InitialTransformType * _arg ) [virtual]

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingInterpolator ( MovingInterpolatorType * _arg ) [virtual]

Set/Get the moving interpolator.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetNumberOfLevels ( const SizeValueType )

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

shrink factors for the virtual domain
sigma smoothing parameter
transform adaptor with specific parameters for the specified level

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetOptimizer ( OptimizerType * _arg ) [virtual]

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetShrinkFactorsPerLevel ( ShrinkFactorsArrayType _arg ) [virtual]

Set/Get the shrink factors for each level. At each resolution level, the itkShrinkImageFilter is called. For a 256x256 image, a shrink factor of 2 reduces the image to 128x128.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetSmoothingSigmasPerLevel ( SmoothingSigmasArrayType _arg ) [virtual]

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified in physical units.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetTransformParametersAdaptorsPerLevel ( TransformParametersAdaptorsContainerType & )

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::StartRegistration ( void ) [inline]

Method that initiates the registration

Definition at line 247 of file itkImageRegistrationMethodv4.h.

Member Data Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

const unsigned int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageDimension = TFixedImage::ImageDimension [static]

ImageDimension constants

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

Definition at line 104 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

CompositeTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CompositeTransform [protected]

Definition at line 313 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentConvergenceValue [protected]

Definition at line 290 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentIteration [protected]

Definition at line 288 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentLevel [protected]

Definition at line 286 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentMetricValue [protected]

Definition at line 289 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

InitialTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_FixedInitialTransform [protected]

Definition at line 297 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

FixedInterpolatorPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_FixedInterpolator [protected]

Definition at line 299 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

FixedImagePointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_FixedSmoothImage [protected]

Definition at line 294 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_IsConverged [protected]

Definition at line 291 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

MetricPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_Metric [protected]

Definition at line 304 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MetricSamplingPercentage [protected]

Definition at line 306 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MetricSamplingStrategy [protected]

Definition at line 305 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

InitialTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MovingInitialTransform [protected]

Definition at line 296 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

MovingInterpolatorPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MovingInterpolator [protected]

Definition at line 300 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

MovingImagePointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MovingSmoothImage [protected]

Definition at line 293 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_NumberOfLevels [protected]

Definition at line 287 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

OptimizerPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_Optimizer [protected]

Definition at line 302 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

OutputTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_OutputTransform [protected]

Definition at line 315 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

ShrinkFactorsArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_ShrinkFactorsPerLevel [protected]

Definition at line 308 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_SmoothingSigmasPerLevel [protected]

Definition at line 309 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = AffineTransform<double, GetImageDimension<TFixedImage>::ImageDimension>>

TransformParametersAdaptorsContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_TransformParametersAdaptorsPerLevel [protected]

Definition at line 311 of file itkImageRegistrationMethodv4.h.

The documentation for this class was generated from the following file: