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itk::BinaryMask3DMeshSource

itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh > Class Template Reference

#include <itkBinaryMask3DMeshSource.h>

Inheritance diagram for itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >:

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Collaboration diagram for itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >:

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List of all members.

Detailed Description

template<class TInputImage, class TOutputMesh>
class itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >

This class tries to construct a 3D mesh surface based on a binary mask. It can be used to integrate a region-based segmentation method and a deformable model into one hybrid framework.
To construct a mesh, we need to construct elements in a voxel and combine those elements later to form the final mesh. Before go through every voxel in the 3D volume, we first construct 2 look up tables. The index of these 2 tables are the on-off combination of the 8 nodes that form the voxel. So both of these tables has the size of $2^8$ bytes. According to previous work, all those $2^8$ combination of the nodes can be grouped into 16 final combinations. In the first table, we record the final combination that can be transformed from the current combination. The entries of the second table are made up of the transforming sequence that is necessary for the current combination transform to one of the final combinations.
We then go through the 3D volume voxel by voxel, using those two tables we have defined to construct elements within each voxel. We then merge all these mesh elements into one 3D mesh.
PARAMETERS
The ObjectValue parameter is used to identify the object. In most applications, pixels in the object region are assigned to "1", so the default value of ObjectValue is set to "1"
REFERENCE
W. Lorensen and H. Cline, "Marching Cubes: A High Resolution 3D Surface Construction Algorithm", Computer Graphics 21, pp. 163-169, 1987.
INPUT
The input should be a 3D binary image.

Definition at line 78 of file itkBinaryMask3DMeshSource.h.

Public Types

typedef OutputMeshType::CellsContainer CellsContainer
typedef OutputMeshType::CellsContainerPointer CellsContainerPointer
typedef OutputMeshType::CellTraits CellTraits
typedef SmartPointer< const
Self > 		ConstPointer
typedef DataObject::Pointer DataObjectPointer
typedef std::vector< DataObjectPointer > DataObjectPointerArray
typedef DataObjectPointerArray::size_type DataObjectPointerArraySizeType
typedef CovariantVector< double, 2 > doubleVector
typedef InputImageType::ConstPointer InputImageConstPointer
typedef InputImageType::IndexType InputImageIndexType
typedef ImageRegionConstIterator<
InputImageType > 		InputImageIterator
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::Pointer InputImagePointer
typedef InputImageType::RegionType InputImageRegionType
typedef TInputImage InputImageType
typedef InputImageType::PixelType InputPixelType
typedef CovariantVector< int, 2 > intVector
typedef OutputMeshType::MeshTraits OMeshTraits
typedef OMeshTraits::PixelType OPixelType
typedef OutputMeshType::PointType OPointType
typedef InputImageType::PointType OriginType
typedef OutputMeshType::Pointer OutputMeshPointer
typedef TOutputMesh OutputMeshType
typedef SmartPointer< Self > Pointer
typedef OutputMeshType::PointsContainer PointsContainer
typedef OutputMeshType::PointsContainerPointer PointsContainerPointer
typedef BinaryMask3DMeshSource Self
typedef InputImageType::SpacingType SpacingType
typedef ImageToMeshFilter<
TInputImage, TOutputMesh > 		Superclass
typedef CellInterface< OPixelType,
CellTraits > 		TCellInterface
typedef TriangleCell< TCellInterface > TriCell
typedef TriCell::SelfAutoPointer TriCellAutoPointer

Public Member Functions

virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
Command * GetCommand (unsigned long tag)
bool GetDebug () const
const InputImageType * GetInput (unsigned int idx)
DataObjectPointerArray & GetInputs ()
const MetaDataDictionary & GetMetaDataDictionary (void) const
MetaDataDictionary & GetMetaDataDictionary (void)
virtual unsigned long GetMTime () const
MultiThreader * GetMultiThreader ()
virtual const char * GetNameOfClass () const
virtual unsigned long GetNumberOfCells ()
DataObjectPointerArraySizeType GetNumberOfInputs () const
virtual unsigned long GetNumberOfNodes ()
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
OutputMeshType * GetOutput (void)
virtual const float & GetProgress ()
virtual int GetReferenceCount () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
DataObject::Pointer MakeOutput (unsigned int idx)
virtual void Modified () const
virtual void PrepareOutputs ()
void Print (std::ostream &os, Indent indent=0) const
virtual void PropagateRequestedRegion (DataObject *output)
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
void SetDebug (bool debugFlag) const
void SetInput (unsigned int idx, const InputImageType *input)
virtual void SetInput (const InputImageType *inputImage)
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetObjectValue (InputPixelType _arg)
void SetOutput (TOutputMesh *output)
virtual void SetProgress (float _arg)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
unsigned long AddObserver (const EventObject &event, Command *) const
unsigned long AddObserver (const EventObject &event, Command *)
DataObjectPointerArraySizeType GetNumberOfOutputs () const
DataObjectPointerArray & GetOutputs ()
virtual const int & GetNumberOfThreads ()
virtual void SetNumberOfThreads (int _arg)
OutputMeshType * GetOutput (unsigned int idx)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOff ()
void ReleaseDataFlagOn ()
virtual void SetReleaseDataFlag (bool flag)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (DataObject *output)

Static Public Member Functions

static void BreakOnError ()
static Pointer New ()
static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOff ()
static void GlobalWarningDisplayOn ()
static void SetGlobalWarningDisplay (bool flag)

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

 BinaryMask3DMeshSource ()
virtual void CacheInputReleaseDataFlags ()
void GenerateData ()
void GenerateInputRequestedRegion ()
virtual void GenerateOutputInformation ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
bool PrintObservers (std::ostream &os, Indent indent) const
void PrintSelf (std::ostream &os, Indent indent) const
virtual void PropagateResetPipeline ()
virtual void ReleaseInputs ()
virtual void RestoreInputReleaseDataFlags ()
void SetNumberOfInputs (unsigned int num)
void SetNumberOfOutputs (unsigned int num)
 ~BinaryMask3DMeshSource ()
virtual void AddInput (DataObject *input)
virtual const unsigned int & GetNumberOfRequiredInputs ()
virtual void RemoveInput (DataObject *input)
virtual void SetNthInput (unsigned int num, DataObject *input)
virtual void SetNumberOfRequiredInputs (unsigned int _arg)
virtual void AddOutput (DataObject *output)
virtual const unsigned int & GetNumberOfRequiredOutputs ()
virtual void RemoveOutput (DataObject *output)
virtual void SetNthOutput (unsigned int num, DataObject *output)
virtual void SetNumberOfRequiredOutputs (unsigned int _arg)
const DataObject * GetInput (unsigned int idx) const
const DataObject * GetOutput (unsigned int idx) const
virtual void PopBackInput ()
virtual void PopFrontInput ()
virtual void PushBackInput (const DataObject *input)
virtual void PushFrontInput (const DataObject *input)
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

TimeStamp m_OutputInformationMTime
InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock
bool m_Updating

Member Typedef Documentation

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::CellsContainer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellsContainer

Definition at line 105 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::CellsContainerPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellsContainerPointer

Definition at line 104 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::CellTraits itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::CellTraits

Definition at line 101 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef SmartPointer<const Self> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::ConstPointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 85 of file itkBinaryMask3DMeshSource.h.

template<class TOutputMesh>
typedef DataObject::Pointer itk::MeshSource< TOutputMesh >::DataObjectPointer [inherited]

Some convenient typedefs.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SpatialObjectToPointSetFilter< TInputSpatialObject, TOutputPointSet >.

Definition at line 56 of file itkMeshSource.h.

typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited]

STL Array of SmartPointers to DataObjects

Definition at line 103 of file itkProcessObject.h.

typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited]

Size type of an std::vector

Definition at line 112 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh>
typedef CovariantVector<double, 2> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::doubleVector

Definition at line 106 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::ConstPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageConstPointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 118 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::IndexType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageIndexType

Type definition for the classified image index type.

Definition at line 124 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef ImageRegionConstIterator< InputImageType > itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageIterator

Definition at line 126 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::PixelType itk::ImageToMeshFilter< TInputImage, TOutputMesh >::InputImagePixelType [inherited]

Reimplemented in itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >, and itk::ImageToParametricSpaceFilter< TInputImage, TOutputMesh >.

Definition at line 56 of file itkImageToMeshFilter.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::Pointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImagePointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 117 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::RegionType itk::ImageToMeshFilter< TInputImage, TOutputMesh >::InputImageRegionType [inherited]

Reimplemented in itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >, and itk::ImageToParametricSpaceFilter< TInputImage, TOutputMesh >.

Definition at line 55 of file itkImageToMeshFilter.h.

template<class TInputImage, class TOutputMesh>
typedef TInputImage itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputImageType

Input Image Type Definition.

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 116 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::PixelType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::InputPixelType

Definition at line 119 of file itkBinaryMask3DMeshSource.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TInputImage, class TOutputMesh>
typedef CovariantVector<int, 2> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::intVector

Definition at line 107 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::MeshTraits itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OMeshTraits

Definition at line 95 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OMeshTraits::PixelType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OPixelType

Definition at line 97 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::PointType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OPointType

Definition at line 96 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::PointType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OriginType

Definition at line 121 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::Pointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OutputMeshPointer

Some convenient typedefs.

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 100 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef TOutputMesh itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::OutputMeshType

Hold on to the type information specified by the template parameters.

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 91 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef SmartPointer<Self> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Pointer

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 84 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::PointsContainer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::PointsContainer

Definition at line 103 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef OutputMeshType::PointsContainerPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::PointsContainerPointer

Definition at line 102 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef BinaryMask3DMeshSource itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Self

Standard "Self" typedef.

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 82 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef InputImageType::SpacingType itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::SpacingType

Definition at line 120 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef ImageToMeshFilter< TInputImage, TOutputMesh > itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::Superclass

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 83 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef CellInterface<OPixelType, CellTraits> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TCellInterface

Define the triangular cell types which forms the surface of the model and will be used in FEM application.

Definition at line 111 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef TriangleCell<TCellInterface> itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TriCell

Definition at line 112 of file itkBinaryMask3DMeshSource.h.

template<class TInputImage, class TOutputMesh>
typedef TriCell::SelfAutoPointer itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::TriCellAutoPointer

Definition at line 113 of file itkBinaryMask3DMeshSource.h.

Constructor & Destructor Documentation

template<class TInputImage, class TOutputMesh>
itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::BinaryMask3DMeshSource (  )  [protected]

template<class TInputImage, class TOutputMesh>
itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::~BinaryMask3DMeshSource (  )  [protected]

Member Function Documentation

virtual void itk::ProcessObject::AbortGenerateDataOff (  )  [virtual, inherited]

virtual void itk::ProcessObject::AbortGenerateDataOn (  )  [virtual, inherited]

Turn on and off the AbortGenerateData flag.

virtual void itk::ProcessObject::AddInput ( DataObject *  input  )  [protected, virtual, inherited]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

virtual void itk::ProcessObject::AddOutput ( DataObject *  output  )  [protected, virtual, inherited]

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual void itk::ProcessObject::CacheInputReleaseDataFlags (  )  [protected, virtual, inherited]

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

virtual void itk::ProcessObject::EnlargeOutputRequestedRegion ( DataObject *   )  [inline, virtual, inherited]

Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.

Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >, itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >, itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >, itk::FFTRealToComplexConjugateImageFilter< TPixel, VDimension >, itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >, itk::IsoContourDistanceImageFilter< TInputImage, TOutputImage >, itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >, itk::KLMRegionGrowImageFilter< TInputImage, TOutputImage >, itk::MRFImageFilter< TInputImage, TClassifiedImage >, itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >, itk::ReinitializeLevelSetImageFilter< TLevelSet >, itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >, itk::WatershedImageFilter< TInputImage >, itk::BlackTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::BSplineDecompositionImageFilter< TInputImage, TOutputImage >, itk::ClosingByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::ConnectedComponentImageFilter< TInputImage, TOutputImage, TMaskImage >, itk::ConnectedThresholdImageFilter< TInputImage, TOutputImage >, itk::ContourDirectedMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::ContourMeanDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DirectedHausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::DoubleThresholdImageFilter< TInputImage, TOutputImage >, itk::ExtractOrthogonalSwath2DImageFilter< TImage >, itk::GradientMagnitudeRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GradientRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedClosingImageFilter< TInputImage, TOutputImage >, itk::GrayscaleConnectedOpeningImageFilter< TInputImage, TOutputImage >, itk::GrayscaleFillholeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicDilateImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGeodesicErodeImageFilter< TInputImage, TOutputImage >, itk::GrayscaleGrindPeakImageFilter< TInputImage, TOutputImage >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::HausdorffDistanceImageFilter< TInputImage1, TInputImage2 >, itk::HConcaveImageFilter< TInputImage, TOutputImage >, itk::HConvexImageFilter< TInputImage, TOutputImage >, itk::HessianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::HMaximaImageFilter< TInputImage, TOutputImage >, itk::HMinimaImageFilter< TInputImage, TOutputImage >, itk::HoughTransform2DCirclesImageFilter< TInputPixelType, TOutputPixelType >, itk::HoughTransform2DLinesImageFilter< TInputPixelType, TOutputPixelType >, itk::ImportImageFilter< TPixel, VImageDimension >, itk::IsolatedConnectedImageFilter< TInputImage, TOutputImage >, itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >, itk::LaplacianRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::MinimumMaximumImageFilter< TInputImage >, itk::NeighborhoodConnectedImageFilter< TInputImage, TOutputImage >, itk::OpeningByReconstructionImageFilter< TInputImage, TOutputImage, TKernel >, itk::OrientImageFilter< TInputImage, TOutputImage >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, TCompare >, itk::RecursiveSeparableImageFilter< TInputImage, TOutputImage >, itk::RegionOfInterestImageFilter< TInputImage, TOutputImage >, itk::SimilarityIndexImageFilter< TInputImage1, TInputImage2 >, itk::SmoothingRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::StatisticsImageFilter< TInputImage >, itk::TobogganImageFilter< TInputImage >, itk::VectorConfidenceConnectedImageFilter< TInputImage, TOutputImage >, itk::WhiteTopHatImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageFileReader< TOutputImage, ConvertPixelTraits >, itk::ImageSeriesReader< TOutputImage >, itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >, itk::MorphologicalWatershedImageFilter< TInputImage, TOutputImage >, itk::RegionalMaximaImageFilter< TInputImage, TOutputImage >, itk::RegionalMinimaImageFilter< TInputImage, TOutputImage >, itk::SliceBySliceImageFilter< TInputImage, TOutputImage, TInputFilter, TOutputFilter, TInternalInputImage, TInternalOutputImage >, itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, TFunction1, TFunction2 >, itk::FFTRealToComplexConjugateImageFilter< TPixel, Dimension >, itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, std::greater< TOutputImage::PixelType > >, itk::ReconstructionImageFilter< TInputImage, TOutputImage, std::less< TOutputImage::PixelType > >, itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::greater< TInputImage::PixelType >, std::greater< TOutputImage::PixelType > >, and itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 225 of file itkProcessObject.h.

template<class TInputImage, class TOutputMesh>
void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GenerateData ( void   )  [protected, virtual]

This method causes the filter to generate its output.

Reimplemented from itk::ProcessObject.

template<class TOutputMesh>
void itk::MeshSource< TOutputMesh >::GenerateInputRequestedRegion (  )  [protected, virtual, inherited]

Requested region of Mesh is specified as i of N unstructured regions. Since all DataObjects should be able to set the requested region in unstructured form, just copy output->RequestedRegion all inputs.

Reimplemented from itk::ProcessObject.

template<class TInputImage, class TOutputMesh>
virtual void itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::GenerateOutputInformation (  )  [inline, protected, virtual]

Prepare the output

Reimplemented from itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 143 of file itkBinaryMask3DMeshSource.h.

virtual void itk::ProcessObject::GenerateOutputRequestedRegion ( DataObject *  output  )  [protected, virtual, inherited]

Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.

Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.

Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>, and itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >.

virtual const bool& itk::ProcessObject::GetAbortGenerateData (  )  [virtual, inherited]

Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

const DataObject* itk::ProcessObject::GetInput ( unsigned int  idx  )  const [protected, inherited]

template<class TInputImage, class TOutputMesh>
const InputImageType* itk::ImageToMeshFilter< TInputImage, TOutputMesh >::GetInput ( unsigned int  idx  )  [inherited]

Get the input image of this process object.

Reimplemented from itk::ProcessObject.

DataObjectPointerArray& itk::ProcessObject::GetInputs (  )  [inline, inherited]

Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.

Definition at line 108 of file itkProcessObject.h.

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]

Returns:
A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]

Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk