itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction > Class Template Reference

#include <itkShapedFloodFilledFunctionConditionalConstIterator.h>

Detailed Description

template<typename TImage, typename TFunction>
class itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >

Iterates over a flood-filled spatial function with read-only access to pixels.

Contributed as a paper to the Insight Journal: https://www.insight-journal.org/browse/publication/204

Definition at line 43 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

Inheritance diagram for itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >:

Collaboration diagram for itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >:

Public Types
using	FunctionInputType = typename TFunction::InputType
using	FunctionType = TFunction
using	ImageType = TImage
using	IndexType = typename TImage::IndexType
using	InternalPixelType = typename TImage::InternalPixelType
using	NeighborhoodIteratorType = typename itk::ShapedNeighborhoodIterator< ImageType >
using	OffsetType = typename TImage::OffsetType
using	PixelType = typename TImage::PixelType
using	RegionType = typename TImage::RegionType
using	SeedsContainerType = typename std::vector< IndexType >
using	Self = ShapedFloodFilledFunctionConditionalConstIterator
using	SizeType = typename TImage::SizeType
Public Types inherited from itk::ConditionalConstIterator< TImage >
using	ImageType = TImage
using	IndexType = typename TImage::IndexType
using	InternalPixelType = typename TImage::InternalPixelType
using	PixelType = typename TImage::PixelType
using	RegionType = typename TImage::RegionType
using	Self = ConditionalConstIterator
using	SizeType = typename TImage::SizeType

Public Member Functions
void	AddSeed (const IndexType seed)
void	ClearSeeds ()
void	DoFloodStep ()
void	FindSeedPixel ()
void	FindSeedPixels ()
virtual void	FullyConnectedOn ()
const PixelType	Get () const override
bool	GetFullyConnected () const
virtual SmartPointer< FunctionType >	GetFunction () const
const IndexType	GetIndex () override
virtual const SeedsContainerType &	GetSeeds () const
void	GoToBegin ()
void	InitializeIterator ()
bool	IsAtEnd () const override
bool	IsPixelIncluded (const IndexType &index) const override=0
void	operator++ () override
Self &	operator= (const Self &it)
void	SetFullyConnected (const bool _arg)
	ShapedFloodFilledFunctionConditionalConstIterator (const ImageType *imagePtr, FunctionType *fnPtr)
	ShapedFloodFilledFunctionConditionalConstIterator (const ImageType *imagePtr, FunctionType *fnPtr, IndexType startIndex)
	ShapedFloodFilledFunctionConditionalConstIterator (const ImageType *imagePtr, FunctionType *fnPtr, std::vector< IndexType > &startIndex)
	~ShapedFloodFilledFunctionConditionalConstIterator () override=default
Public Member Functions inherited from itk::ConditionalConstIterator< TImage >
	ConditionalConstIterator ()=default
Self &	operator= (const Self &it)
virtual	~ConditionalConstIterator ()=default

Static Public Member Functions
static unsigned int	GetIteratorDimension ()
Static Public Member Functions inherited from itk::ConditionalConstIterator< TImage >
static unsigned int	GetIteratorDimension ()

Static Public Attributes
static constexpr unsigned int	NDimensions = TImage::ImageDimension
Static Public Attributes inherited from itk::ConditionalConstIterator< TImage >
static constexpr unsigned int	NDimension = TImage::ImageDimension

Protected Types
using	TTempImage = Image< unsigned char, Self::NDimensions >

Protected Attributes
bool	m_FoundUncheckedNeighbor {}
SmartPointer< FunctionType >	m_Function {}
ImageType::PointType	m_ImageOrigin {}
RegionType	m_ImageRegion {}
ImageType::SpacingType	m_ImageSpacing {}
std::queue< IndexType >	m_IndexStack {}
bool	m_IsValidIndex {}
FunctionInputType	m_LocationVector {}
NeighborhoodIteratorType	m_NeighborhoodIterator {}
SeedsContainerType	m_Seeds {}
TTempImage::Pointer	m_TempPtr {}
bool	m_FullyConnected {}
Protected Attributes inherited from itk::ConditionalConstIterator< TImage >
ImageType::ConstWeakPointer	m_Image {}
bool	m_IsAtEnd { false }
RegionType	m_Region {}

Member Typedef Documentation

FunctionInputType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::FunctionInputType = typename TFunction::InputType

Type of vector used to store location info in the spatial function

Definition at line 54 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

FunctionType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::FunctionType = TFunction

Type of function

Definition at line 51 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

ImageType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::ImageType = TImage

Image type alias support

Definition at line 72 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

IndexType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::IndexType = typename TImage::IndexType

Index type alias support

Definition at line 57 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

InternalPixelType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::InternalPixelType = typename TImage::InternalPixelType

Internal Pixel Type

Definition at line 75 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

NeighborhoodIteratorType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::NeighborhoodIteratorType = typename itk::ShapedNeighborhoodIterator<ImageType>

Internal Neighborhood Iterator Type

Definition at line 81 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

OffsetType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::OffsetType = typename TImage::OffsetType

Offset type alias support

Definition at line 63 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

PixelType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::PixelType = typename TImage::PixelType

External Pixel Type

Definition at line 78 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

RegionType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::RegionType = typename TImage::RegionType

Region type alias support

Definition at line 69 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

SeedsContainerType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::SeedsContainerType = typename std::vector<IndexType>

Index Container Type

Definition at line 60 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

Self

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::Self = ShapedFloodFilledFunctionConditionalConstIterator

Standard class type aliases.

Definition at line 48 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

SizeType

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::SizeType = typename TImage::SizeType

Size type alias support

Definition at line 66 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

TTempImage

template<typename TImage , typename TFunction >

using itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::TTempImage = Image<unsigned char, Self::NDimensions>

protected

A temporary image used for storing info about indices 0 = pixel has not yet been processed 1 = pixel is not inside the function 2 = pixel is inside the function, neighbor check incomplete 3 = pixel is inside the function, neighbor check complete

Definition at line 260 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

Constructor & Destructor Documentation

ShapedFloodFilledFunctionConditionalConstIterator() [1/3]

template<typename TImage , typename TFunction >

itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::ShapedFloodFilledFunctionConditionalConstIterator	(	const ImageType *	imagePtr,
		FunctionType *	fnPtr,
		IndexType	startIndex
	)

Constructor establishes an iterator to walk a particular image and a particular region of that image. This version of the constructor uses an explicit seed pixel for the flood fill, the "startIndex"

ShapedFloodFilledFunctionConditionalConstIterator() [2/3]

template<typename TImage , typename TFunction >

itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::ShapedFloodFilledFunctionConditionalConstIterator	(	const ImageType *	imagePtr,
		FunctionType *	fnPtr,
		std::vector< IndexType > &	startIndex
	)

Constructor establishes an iterator to walk a particular image and a particular region of that image. This version of the constructor uses a list of seed pixels for the flood fill

ShapedFloodFilledFunctionConditionalConstIterator() [3/3]

template<typename TImage , typename TFunction >

itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::ShapedFloodFilledFunctionConditionalConstIterator	(	const ImageType *	imagePtr,
		FunctionType *	fnPtr
	)

Constructor establishes an iterator to walk a particular image and a particular region of that image. This version of the constructor should be used when the seed pixel is unknown

~ShapedFloodFilledFunctionConditionalConstIterator()

template<typename TImage , typename TFunction >

itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::~ShapedFloodFilledFunctionConditionalConstIterator ( )

overridedefault

Default Destructor.

Member Function Documentation

AddSeed()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::AddSeed ( const IndexType  seed )

inline

Put more seeds on the list

Definition at line 173 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

ClearSeeds()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::ClearSeeds ( )

inline

Clear all the seeds

Definition at line 180 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

DoFloodStep()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::DoFloodStep

(

)

FindSeedPixel()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::FindSeedPixel

(

)

Automatically find a seed pixel and set m_StartIndex. Does nothing if a seed pixel isn't found. A seed pixel is determined by traversing the input image's LargestPossibleRegion and applying the IsPixelIncluded() test.

FindSeedPixels()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::FindSeedPixels

(

)

Automatically find all seed pixels.

FullyConnectedOn()

template<typename TImage , typename TFunction >

virtual void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::FullyConnectedOn ( )

virtual

Get()

template<typename TImage , typename TFunction >

const PixelType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::Get ( ) const

inlineoverridevirtual

Get the pixel value

Implements itk::ConditionalConstIterator< TImage >.

Reimplemented in itk::ShapedFloodFilledImageFunctionConditionalIterator< TImage, TFunction >.

Definition at line 159 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

GetFullyConnected()

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GetFullyConnected

(

)

const

GetFunction()

template<typename TImage , typename TFunction >

virtual SmartPointer<FunctionType> itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GetFunction ( ) const

inlinevirtual

Definition at line 228 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

GetIndex()

template<typename TImage , typename TFunction >

const IndexType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GetIndex ( )

inlineoverridevirtual

Get the index. This provides a read only reference to the index. This causes the index to be calculated from pointer arithmetic and is therefore an expensive operation.

See also

SetIndex

Implements itk::ConditionalConstIterator< TImage >.

Definition at line 152 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

GetIteratorDimension()

template<typename TImage , typename TFunction >

static unsigned int itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GetIteratorDimension ( )

inlinestatic

Get the dimension (size) of the index.

Definition at line 142 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

GetSeeds()

template<typename TImage , typename TFunction >

virtual const SeedsContainerType& itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GetSeeds ( ) const

inlinevirtual

Definition at line 246 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

GoToBegin()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::GoToBegin ( )

inline

Move an iterator to the beginning of the region. "Begin" is defined as the first pixel in the region.

Definition at line 188 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

InitializeIterator()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::InitializeIterator

(

)

Initializes the iterator, called from constructor

IsAtEnd()

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::IsAtEnd ( ) const

inlineoverridevirtual

Is the iterator at the end of the region?

Implements itk::ConditionalConstIterator< TImage >.

Definition at line 166 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

IsPixelIncluded()

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::IsPixelIncluded ( const IndexType &  index ) const

overridepure virtual

Compute whether the index of interest should be included in the flood

Implements itk::ConditionalConstIterator< TImage >.

Implemented in itk::ShapedFloodFilledImageFunctionConditionalConstIterator< TImage, TFunction >.

operator++()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::operator++ ( )

inlineoverridevirtual

Walk forward one index

Implements itk::ConditionalConstIterator< TImage >.

Definition at line 219 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

operator=()

template<typename TImage , typename TFunction >

Self& itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::operator= ( const Self &  it )

inline

operator= is provided to make sure the handle to the image is properly reference counted.

Definition at line 133 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

References itk::ConditionalConstIterator< TImage >::m_Image, and itk::ConditionalConstIterator< TImage >::m_Region.

SetFullyConnected()

template<typename TImage , typename TFunction >

void itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::SetFullyConnected

(

const bool

_arg

)

When m_FullyConnected is set to true, the neighborhood iterator will inspect an 8 respectively 26 neighborhood. When the value is set to false, the neighborhood will be 4 in 2D and 6 in 3D.

Member Data Documentation

m_FoundUncheckedNeighbor

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_FoundUncheckedNeighbor {}

protected

Indicates whether or not we've found a neighbor that needs to be checked.

Definition at line 287 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_FullyConnected

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_FullyConnected {}

protected

Defines the connectivity of the neighborhood iterator. In case of 2D the default connectivity is 4 (6 in 3D) and when m_FullyConnected is set to true the connectivity is 8 (26 in 3D).

Definition at line 297 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_Function

template<typename TImage , typename TFunction >

SmartPointer<FunctionType> itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_Function {}

protected

Smart pointer to the function we're evaluating

Definition at line 253 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_ImageOrigin

template<typename TImage , typename TFunction >

ImageType::PointType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_ImageOrigin {}

protected

The origin of the source image

Definition at line 268 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_ImageRegion

template<typename TImage , typename TFunction >

RegionType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_ImageRegion {}

protected

Region of the source image

Definition at line 277 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_ImageSpacing

template<typename TImage , typename TFunction >

ImageType::SpacingType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_ImageSpacing {}

protected

The spacing of the source image

Definition at line 271 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_IndexStack

template<typename TImage , typename TFunction >

std::queue<IndexType> itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_IndexStack {}

protected

Stack used to hold the path of the iterator through the image

Definition at line 280 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

Referenced by itk::ShapedFloodFilledImageFunctionConditionalIterator< TImage, TFunction >::Get(), and itk::ShapedFloodFilledImageFunctionConditionalIterator< TImage, TFunction >::Set().

m_IsValidIndex

template<typename TImage , typename TFunction >

bool itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_IsValidIndex {}

protected

Indicates whether or not an index is valid (inside an image)/

Definition at line 290 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_LocationVector

template<typename TImage , typename TFunction >

FunctionInputType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_LocationVector {}

protected

Location vector used in the flood algorithm

Definition at line 283 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_NeighborhoodIterator

template<typename TImage , typename TFunction >

NeighborhoodIteratorType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_NeighborhoodIterator {}

protected

The neighborhood iterator

Definition at line 274 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_Seeds

template<typename TImage , typename TFunction >

SeedsContainerType itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_Seeds {}

protected

A list of locations to start the recursive fill

Definition at line 265 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

m_TempPtr

template<typename TImage , typename TFunction >

TTempImage::Pointer itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::m_TempPtr {}

protected

Definition at line 262 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

NDimensions

template<typename TImage , typename TFunction >

constexpr unsigned int itk::ShapedFloodFilledFunctionConditionalConstIterator< TImage, TFunction >::NDimensions = TImage::ImageDimension

staticconstexpr

Dimension of the image the iterator walks. This constant is needed so that functions that are templated over image iterator type (as opposed to being templated over pixel type and dimension) can have compile time access to the dimension of the image that the iterator walks.

Definition at line 87 of file itkShapedFloodFilledFunctionConditionalConstIterator.h.

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The documentation for this class was generated from the following file:

• itkShapedFloodFilledFunctionConditionalConstIterator.h