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</o:shapelayout></xml><![endif]--></head><body lang=DE-AT link=blue vlink=purple style='word-wrap: break-word;-webkit-nbsp-mode: space;-webkit-line-break: after-white-space'><div class=WordSection1><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Hi David/Gaeten/Bradley,<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>thank you very much for the replies. <o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>I know what to do now. I will find all the missing file and check the migration guide to know what has happened.<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Thank you very much for your replies.<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>Regards,<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'>kana<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D'><o:p> </o:p></span></p><div><div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal><b><span lang=EN-US style='font-size:10.0pt;font-family:"Tahoma","sans-serif"'>From:</span></b><span lang=EN-US style='font-size:10.0pt;font-family:"Tahoma","sans-serif"'> insight-users-bounces@itk.org [mailto:insight-users-bounces@itk.org] <b>On Behalf Of </b>Bradley Lowekamp<br><b>Sent:</b> 08 July 2011 14:42<br><b>To:</b> Gaëtan Lehmann<br><b>Cc:</b> ITK Users; Hans J. Johnson; Arunachalam Kana<br><b>Subject:</b> Re: [Insight-users] Missing files in ITK 4<o:p></o:p></span></p></div></div><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Hello,<o:p></o:p></p><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal>itkListSampleBase.h was re factored in 2007 as part of the Statistics framework refactoring. It was an CMake option for a couple of years in ITK v3. It migration guide is separate and can be found here:<o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal><a href="http://www.itk.org/Wiki/index.php?title=Proposals:Refactoring_Statistics_Framework_2007_Migration_Users_Guide&oldid=35773">http://www.itk.org/Wiki/index.php?title=Proposals:Refactoring_Statistics_Framework_2007_Migration_Users_Guide&oldid=35773</a><o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal>Here is the relevant information:<o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><table class=MsoNormalTable border=1 cellpadding=0 style='background:white;z-index:auto'><tr><td style='padding:.75pt .75pt .75pt .75pt'><p class=MsoNormal><span style='font-size:10.0pt;color:black'>ListSampleBase<o:p></o:p></span></p></td><td style='padding:.75pt .75pt .75pt .75pt'><p class=MsoNormal><span style='font-size:10.0pt;color:black'>Deprecated. The class was unecessary, it was providing only a Search() method that should in fact be provided by a process class, not a data container.<o:p></o:p></span></p></td><td style='padding:.75pt .75pt .75pt .75pt'><p class=MsoNormal style='mso-margin-top-alt:auto;margin-bottom:1.2pt;margin-left:18.0pt;text-indent:-18.0pt;line-height:18.0pt;mso-list:l0 level1 lfo1'><![if !supportLists]><span style='font-size:10.0pt;font-family:Wingdings;color:black'><span style='mso-list:Ignore'>§<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span style='font-size:10.0pt;color:black'>If you were deriving a class from the itk::Statistics::ListSampleBase, you should now derive directly from the itk::Statistics::Sample class.<o:p></o:p></span></p><p class=MsoNormal style='mso-margin-top-alt:auto;margin-bottom:1.2pt;margin-left:18.0pt;text-indent:-18.0pt;line-height:18.0pt;mso-list:l0 level1 lfo1'><![if !supportLists]><span style='font-size:10.0pt;font-family:Wingdings;color:black'><span style='mso-list:Ignore'>§<span style='font:7.0pt "Times New Roman"'> </span></span></span><![endif]><span style='font-size:10.0pt;color:black'>If you were using the Search() method you can get that functionality now from the (refactored) NeighborhoodSampler filter class. Note that the NeighborhoodSampler now allows users to setup a specific distance metric.<o:p></o:p></span></p></td></tr></table><div><p class=MsoNormal><o:p> </o:p></p></div></div><div><p class=MsoNormal><o:p> </o:p></p><div><div><p class=MsoNormal>On Jul 8, 2011, at 8:09 AM, Gaëtan Lehmann wrote:<o:p></o:p></p></div><p class=MsoNormal><br><br><o:p></o:p></p><div><p class=MsoNormal><br>Le 8 juil. 11 à 13:12, David Doria a écrit :<br><br><br><o:p></o:p></p><p class=MsoNormal>On Fri, Jul 8, 2011 at 5:02 AM, Arunachalam Kana<o:p></o:p></p><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><<a href="mailto:Kana.Arunachalam@fh-wels.at">Kana.Arunachalam@fh-wels.at</a>> wrote:<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Hi ITK User,<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>I am writing again regarding missing files in itk 4.<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>I have downloaded ITK 4 from GIT. After i downloaded, I found some <o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>files<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>are missing. Example:<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>itkListSampleBase.h<o:p></o:p></p></blockquote></blockquote><p class=MsoNormal><br>This one was part of the statistics framework which have been quite <br>heavily refactored, but unfortunately not documented in the Migration <br>directory (it was done before ITK v4).<br><br><br><o:p></o:p></p><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>itkPointLocator.h<o:p></o:p></p></blockquote></blockquote><p class=MsoNormal><br>This one was removed in that change:<br><br>commit 09f2103f7f81e371007142d8c6d9939fd587bd12<br>Author: Hans Johnson <<a href="mailto:hans-johnson@uiowa.edu">hans-johnson@uiowa.edu</a>><br>Date: Wed Sep 22 22:26:03 2010 -0500<br><br> Removed code that did nothing.<br><br> It appears as if the itkPointLocator class was the stub<br> of functionality that was added 2003, but never fully<br> implemented. As BUG_0011157 was unraveled, it became<br> more evident that this entire class does not seem to have<br> any purpose. After removing the class, all tests still pass.<br><br><br><br><o:p></o:p></p><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>the download link was: <a href="http://itk.org/ITK.git">http://itk.org/ITK.git</a><o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Am i missing something here? Any advice is appreciated.<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Thank you,<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Best regards,<o:p></o:p></p></blockquote></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>I can confirm those files are not in git master. They must have been<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>replaced/deprecated. Unfortunately I don't know by what.<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>David<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>_____________________________________<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Powered by <a href="http://www.kitware.com">www.kitware.com</a><o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Visit other Kitware open-source projects at<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><a href="http://www.kitware.com/opensource/opensource.html">http://www.kitware.com/opensource/opensource.html</a><o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Kitware offers ITK Training Courses, for more information visit:<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><a href="http://www.kitware.com/products/protraining.html">http://www.kitware.com/products/protraining.html</a><o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Please keep messages on-topic and check the ITK FAQ at:<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><a href="http://www.itk.org/Wiki/ITK_FAQ">http://www.itk.org/Wiki/ITK_FAQ</a><o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><o:p> </o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal>Follow this link to subscribe/unsubscribe:<o:p></o:p></p></blockquote><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><p class=MsoNormal><a href="http://www.itk.org/mailman/listinfo/insight-users">http://www.itk.org/mailman/listinfo/insight-users</a><o:p></o:p></p></blockquote><p class=MsoNormal><br>-- <br>Gaëtan Lehmann<br>Biologie du Développement et de la Reproduction<br>INRA de Jouy-en-Josas (France)<br>tel: +33 1 34 65 29 66 fax: 01 34 65 29 09<br><a href="http://mima2.jouy.inra.fr">http://mima2.jouy.inra.fr</a> <a href="http://www.itk.org">http://www.itk.org</a><br><a href="http://www.bepo.fr">http://www.bepo.fr</a><br><br><PGP.sig>_____________________________________<br>Powered by www.kitware.com<br><br>Visit other Kitware open-source projects at<br>http://www.kitware.com/opensource/opensource.html<br><br>Kitware offers ITK Training Courses, for more information visit:<br>http://www.kitware.com/products/protraining.html<br><br>Please keep messages on-topic and check the ITK FAQ at:<br>http://www.itk.org/Wiki/ITK_FAQ<br><br>Follow this link to subscribe/unsubscribe:<br>http://www.itk.org/mailman/listinfo/insight-users<o:p></o:p></p></div></div><p class=MsoNormal><o:p> </o:p></p></div></div></body></html>