<html><head><style type="text/css"><!-- DIV {margin:0px;} --></style></head><body><div style="font-family:'bookman old style', 'new york', times, serif;font-size:12pt"><div></div><div><br> Thank you very much , I have succesfully integrated this in my project and the wrote the volume. Now , the problem is, when I show the slices in the GUI, by the LiverTumorSegmentation example, the images appear very noisy and unclear. Visualizing the same data with other apps, such as Snap, reveals that the slices are just fine.</div><font style="color:rgb(0, 0, 127);" size="3"><span style="font-family:bookman old style, new york, times, serif;font-style:italic;font-weight:bold;"></span></font><font style="font-weight:bold;" color="#000080"><div style="font-style:italic;font-size:medium;"><br></div></font><div>What do you suggest using for visualizing the slices?</div><div style="font-family:bookman old style, new york, times, serif;font-size:12pt"><br><div
style="font-family:times new roman, new york, times, serif;font-size:12pt"><font size="2" face="Tahoma"><hr size="1"><b><span style="font-weight: bold;">From:</span></b> Neil Panjwani <paniwani@gmail.com><br><b><span style="font-weight: bold;">To:</span></b> ioana vasilescu <ioanav88@yahoo.com><br><b><span style="font-weight: bold;">Cc:</span></b> insight-users@itk.org<br><b><span style="font-weight: bold;">Sent:</span></b> Sun, June 19, 2011 7:59:37 PM<br><b><span style="font-weight: bold;">Subject:</span></b> Re: [Insight-users] Brain Tumor Segmentation<br></font><br>
Have you seen section 7.12.3 of the ITK Software Guide titled "Reading a 2D Dicom Series and Writing a Volume"?<div><br></div><div><span><a target="_blank" href="http://www.itk.org/ItkSoftwareGuide.pdf">http://www.itk.org/ItkSoftwareGuide.pdf</a></span><br>
<br><div class="gmail_quote">On Sun, Jun 19, 2011 at 12:39 PM, ioana vasilescu <span dir="ltr"><<a rel="nofollow" ymailto="mailto:ioanav88@yahoo.com" target="_blank" href="mailto:ioanav88@yahoo.com">ioanav88@yahoo.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
<div><div style="font-size:12pt;color:#000000;"><div></div><div><br> Hi everyone!</div><div>I'm working on a project right now and my tasks are:</div>
<div>1. Read DICOM series of 2D images ( MRI - Brain)</div><div>2. Transform 2D into volume</div><div>3. Perform a segmentation on the brain tumor in the images and visualize the 3D tumor</div><div><br></div><div>So far, using LiverTumorSegmentation as a model I have made a GUI with fltk and managed to display the initial set of images. From this point I need a little guidance.</div>
<div>For task nr 2. I took a look at DicomSeriesReadImageView but I don't really understand how to integrate this in my project.</div><div>If anyone could help with this , I would appreciate it.</div><div>Thank you!</div>
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