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<p class=MsoNormal>Hi,<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>I tried to convert NRRD, which is ITK supported format, data
volumes into DICOM volumes using the generic converter given in <i>ImageReadWrite.exe</i>
with the following arguments<o:p></o:p></p>
<p class=MsoListParagraph style='text-indent:-18.0pt;mso-list:l0 level1 lfo1'><![if !supportLists]><span
style='mso-list:Ignore'>-<span style='font:7.0pt "Times New Roman"'>
</span></span><![endif]>Input file: LTS_IMG05.raw<o:p></o:p></p>
<p class=MsoListParagraph style='text-indent:-18.0pt;mso-list:l0 level1 lfo1'><![if !supportLists]><span
style='mso-list:Ignore'>-<span style='font:7.0pt "Times New Roman"'>
</span></span><![endif]>Output file: LTS_IM05.dcm (also tried .dic and .dicom
file extensions)<o:p></o:p></p>
<p class=MsoListParagraph style='text-indent:-18.0pt;mso-list:l0 level1 lfo1'><![if !supportLists]><span
style='mso-list:Ignore'>-<span style='font:7.0pt "Times New Roman"'>
</span></span><![endif]>Exception:<o:p></o:p></p>
<p class=MsoListParagraph><span style='color:#C00000'>itk::ImageFileReaderException
(0146EEC0)<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>Location: "void
__thiscall itk::ImageFileReader<class itk::Image<short,3>,class
itk::DefaultConvertPixelTraits<short> >::GenerateOutputInformation(void)"<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>File:
c:\users\t-egerem\software\insighttoolkit-3.14.0\src\code\io\itkImageFileReader.txx<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>Line: 144<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>Description: Could
not create IO object for file
C:\Users\t-egerem\Downloads\3D-Liver-Tumor-Segmentation-Challenge-2008\Extracted-Files\Testing-Data\LTS_IMG05.raw<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'> Tried to create
one of the following:<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
GDCMImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
MetaImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
PNGImageIO<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
VTKImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
GiplImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
BioRadImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
LSMImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
AnalyzeImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
NiftiImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
StimulateImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
JPEGImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
TIFFImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
NrrdImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
BMPImageIO<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'>
DICOMImageIO2<o:p></o:p></span></p>
<p class=MsoListParagraph><span style='color:#C00000'> You probably
failed to set a file suffix or set the suffix to an unsupported type.<o:p></o:p></span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Then I tried to shortcut the pluggable factory mechanism and
it does not as well with the same data it throws the following error message<o:p></o:p></p>
<p class=MsoNormal>
<span style='color:#C00000'>itk::ExceptionObject (0122F614)<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>Location:
"void __thiscall itk::ImageFileReader<class
itk::Image<short,3>,class itk::DefaultConvertPixelTraits<short>
>::EnlargeOutputRequestedRegion(class itk::DataObject *)"File:
c:\users\t-egerem\software\insighttoolkit-3.14.0\src\code\io\itkImageFileReader.txx<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>Line:
342<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>Description:
itk::ERROR: ImageFileReader(0172F7C0): ImageIO returns IO region that does not
fully contain the requested regionRequested region: ImageRegion (0122F8D8)<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Dimension: 3<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Index: [0, 0, 0]<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Size: [0, 0, 0]<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>StreamableRegion
region: ImageRegion (0172F8A4)<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Dimension: 3<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Index: [0, 0, 0]<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:36.0pt'><span style='color:#C00000'>
Size: [0, 0, 0]<o:p></o:p></span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>If you can think of a solution can you please point it out
to me ?<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Regards,<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Ezequiel Geremia<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
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