[Insight-users] [ANNOUNCE] ITK 4.4.0 has been released!
Panagiotis Foteinos
panagiotis.foteinos at gmail.com
Wed Jul 10 13:07:40 EDT 2013
Greetings.
Glad to see that MINC is supported.
So, I enblabled MINC support and everything compiled nicely. Attempting to
read, however, a *.mnc file, yielded the following error:
********************
/home/pfoteino/local/bin/itk-4.4.0-bin/release/Modules/ThirdParty/MINC/ITKMINC2_ExternalProject/libsrc2/volume.c:142
(from MINC2): Unable to open file 'full16_100um_2009b_sym.mnc'
ExceptionObject caught!
itk::ExceptionObject (0x1fc2440)
Location: "unknown"
File:
/home/pfoteino/local/src/ITK-4.4.0/Modules/IO/ImageBase/src/itkImageIOBase.cxx
Line: 366
Description: itk::ERROR: MINCImageIO(0x1fc0cd0): Unknown component type: 0
********************
The MINC image I used was taken from the BigBrain project.
Any suggestions?
Best Regards,
Panagiotis Foteinos
On Mon, Jun 3, 2013 at 5:06 PM, Matt McCormick
<matt.mccormick at kitware.com>wrote:
> The InsightToolkit (ITK) 4.4.0 has been released!
>
> The 4.4 release is a major milestone that marks the hard work of many
> outstanding community members.
>
> Links to the Sourceforge.net tarballs can be found on the download page:
>
> http://www.itk.org/ITK/resources/software.html
>
>
> We will discuss what is new in 4.4.0 on Tuesday, June 11 at 3PM
> Eastern Time (GMT -5). To take part, join the “ITK BarCamp”
> GooglePlus Community, and join the “What’s New in Release 4.4.0”
> Event. A link to the YouTube live stream of the event will also be
> posted at
>
> http://www.itk.org/ITK/resources/webinars.html
>
>
> In summary:
>
> We are excited to announce two new ImageIO modules available in the
> main repository. The MINC ImageIO module provides a bridge to the
> MINC file format, a powerful medical imaging format used by the MINC
> library, another open source library with many features similar to
> ITK. The new MINC module, which has Image IO and Transform IO
> capabilities, is considered experimental and must be enabled by
> turning Module_ITKIOMINC ON in CMake’s configuration. This will
> automatically build the MINC library, which is now available on Mac,
> Linux, and Windows. The HDF5-based MINC2 file format is supported,
> but support for the NetCDF-based MINC1 file format is not supported
> because NetCDF is not distributed with ITK.
>
> Another new ImageIO module that expands the reach of ITK is the SCIFIO
> module. SCIFIO is a refactoring of the Bio-Formats library. This
> module provides access to a wide range of file formats encountered in
> life sciences/microscopy environments. This experimental feature is
> available a Remote module; to enable it, set the Fetch_SCIFIO CMake
> variable to ON. Many improvements and fixes are ongoing for this
> module; Git master is recommended for those interested in this module.
>
> A number of improvements were also made to DCMTK ImageIO, but this
> module remains experimental on disabled by default. To try DCMTK
> ImageIO support, turn the CMake option Module_ITKIODCMTK ON. For Unix
> platforms, the supporting DCMTK library will automatically be built as
> a CMake ExternalProject. On Windows, the DCMTK library must be built
> independently of the ITK build system. Then, specify the location to
> the external build after setting the CMake option ITK_USE_SYSTEM_DCMTK
> ON.
>
> A number of performance improvements were made to QuadEdgeMesh
> processing and memory copy functions. A new ImageScanlineIterator is
> available. This iterator can be used in many of the cases where an
> ImageRegionIterator is applied, but it has better performance.
>
> The approach to split image regions for parallel processing is no
> longer hard coded to make multiple options available.
>
> An API design change was started to improve the implied functionality
> of the GetObject methods. The non-const “GetObjectMacro” has been
> replaced with a “GetModifiableObjectMacro” that will result in a
> GetModifiableXXX method instead of a GetXXX method. This makes the
> non-const nature of the method and the circumvention of pipeline
> update semantics explicit for both the code author and those reading
> the class API. This was implemented in a backwards compatible way,
> and it will only be enforced if ITK_FUTURE_LEGACY_REMOVE is defined.
>
> Support for the Google Double Conversion library was added to improve
> the reading and writing of double values as ASCII text with the
> intention to improve the precision of the text transform file format’s
> serialization.
>
> It is now easier to identify filter inputs by both a string name or an
> integer index. The internal methods to store and retrieve inputs by
> either string or index was correspondingly refactored, and performance
> was also improved.
>
> JPEG ImageIO now writes and reads image spacing in a manner similar to
> the TIFF ImageIO.
>
> An extensive amount of code cruft was removed and coding style was
> made more consistent; ITK gets more stylish and classy with every
> release!
>
> The ExternalData method to store large testing data outside of the Git
> repository is now in upstream CMake 2.8.11. Our internal version has
> been updated to the improved version in CMake.
>
> The minimum CMake required version was bumped to 2.8.8 on Windows and
> 2.8.5 otherwise. This may be increased even higher in the near future
> to ensure all CMake features utilized operate correctly.
>
> Known assertion failures occur when compiled under Visual Studio in
> the Debug configuration. This will be fixed in 4.4.1. If this has a
> significant negative impact on your work, please consider contributing
> a Nightly dashboard build under this configuration. As previously
> scheduled, Visual Studio 2005 is no longer be supported.
>
> Support for building against system third party libraries continues to
> improve. Further improvements are expected for version 4.5.
>
> All tests are now passing again on the Nightly big-endian dashboard system.
>
> InsightApplications (ITKApps) has seen fixes in the FLTK superbuild
> and the TCL wrapped applications.
>
>
>
> Changes in ITK from v4.3.0 to v4.4.0 from the Git log:
>
> Ali Ghayoor (7):
> ENH: Get the internal transforms of SyN registration filter
> COMP: Fix all valid cppcheck warnings in "Module/Filtering"
> directory
> COMP: Fix all valid cppcheck warnings in "Module/Core" directory
> COMP: Fix all valid cppcheck warnings in "Module/Segmentation"
> directory
> COMP: Fix all valid cppcheck warnings in "Module/Registration"
> directory
> COMP: Fix all valid cppcheck warnings in ITK (last patch)
> COMP: Fix all valid cppcheck warnings in "ITK/Module" directory
>
> Arnaud Gelas (4):
> PERF: improve performance of couple of methods of itk::QuadEdgeMesh
> PERF: couple of speed up improvements for QuadEdgeMesh processing
> PERF: avoid doing GetPoint and SetPoint for the same point
> ENH: Simplify template parameters in itk::PointsLocator
>
> Bill Lorensen (20):
> ENH: Prevent duplicate loading of dynamic libraries
> COMP: Fix compile error in PhilipsRECImageIO
> COMP: Fix compile error in PhilipsRECImageIO
> BUG: Memory leak after failed RegisterFactory
> BUG: Warn on directories
> ENH: Refactor DoubleToString into NumberToString
> DOC: Escape hash in comment
> STYLE: Apply kwstyle to Modules/Core tests
> STYLE: Apply kwstyle to Modules/Filtering tests
> STYLE: Apply kwstyle to Modules/Segmentation tests
> STYLE: Apply kwstyle to Modules/IO tests
> STYLE: Apply kwstyle to Modules/Numerics tests
> STYLE: Apply kwstyle to Modules/Registration tests
> STYLE: Apply kwstyle to some tests
> BUG: Memory leak after failed RegisterFactory
> COMP: Remove copy_n wrapper for standard std::copy
> COMP: Make the test stable by removing random source
> COMP: More baselines
> COMP: Another baseline
> COMP: Missing return error after exception
>
> Brad King (14):
> BUG: ExternalData: Do not match directory names when resolving
> DATA{}
> STYLE: ExternalData: Cleanup stray TODO and typo in comments
> STYLE: ExternalData: Remove unused private interface
> ENH: ExternalData: Improve series matching using an explicit syntax
> ENH: ExternalData: Allow ()-groups in series match regex
> ENH: ExternalData: Allow DATA{} syntax to reference directories
> ENH: Configure new ExternalData series parsing for ITK baselines
> BUG: ExternalData: Collapse ../ components in DATA{} paths
> BUG: Fix "git gerrit-push" for content links with spaces
> STYLE: Add detail to the vxl update instructions
> STYLE: Add more detail to the vxl update instructions
> ENH: ExternalData: Partly generalize hash algo/ext handling
> ENH: ExternalData: Attach download rules to content links in IDEs
> ENH: ExternalData: Preserve escaped semicolons during argument
> expansion
>
> Bradley Lowekamp (78):
> STYLE: Use ITK_ prefix for FFTW cmake variables and defines
> BUG: Change default boundary condition to ZeroFlux
> ENH: wrapping itkImageSeriesWriter
> BUG: incorrect CMake variable for system jpeg include
> DOC: Correct description of Bitwise binary filters
> BUG: incorrect CMake variable for system jpeg include
> COMP: GetTimeVaryingVelocityField methods did not compile
> ENH: Creating templateless region splitter classes
> ENH: Adding image region splitter for separable filtering
> PERF: Do not spawn threads that will not be used.
> ENH: ImageIO's now use ImageRegionSplitter base
> COMP: Specify export for Specialized Array output operators
> ENH: making old ImageRegionSplitter compatible with new splitter
> BUG: initials Direction IVAR
> STYLE: never a space before;
> COMP: Address unused parameter warning in GPU code
> BUG: Do not create static initialized ITK objects
> ENH: Converted Multidimensional splitter to new base class
> ENH: moving old ImageRegionSplitter to Deprecated Module
> BUG: Only thread 0 should report progress.
> PERF: Use std::fill for image filling
> BUG: Only thread 0 should report progress in LabelMapFilters
> COMP: Adding missing header
> BUG: Using CMake variable in external builds with autoconf
> environment
> BUG: initialize InverseCovariance size with degenerate matrix
> ENH: Adding numeric_traits specializations for "long long"
> ENH: instantiate vnl types with "long long" on all platforms
> Revert "ENH: Use named inputs in BinaryReconstruction filters."
> BUG: initialize InverseCovariance size with degenerate matrix
> BUG: Using CMake variable in external builds with autoconf
> environment
> COMP: Address unused parameter warning in GPU code
> BUG: Only thread 0 should report progress in LabelMapFilters
> BUG: Only thread 0 should report progress.
> COMP: Adding missing header
> ENH: Adding support for instantiating long long pixel types
> BUG: VerifyPreconditions checks required named inputs
> PERF: Adding performance oriented ScanlineIterator
> COMP: Remove copy_n wrapper for standard std::copy
> COMP: Missing ProgressReporter header
> COMP: Suppress linker warning from fftw external project
> COMP: Add missing ImageRegionIterator header in test
> BUG: Don't allocate empty names in Get I/O Names methods
> COMP: Make GPUFunctorBase destructor virtual
> PERF: Changing filters to use ImageScanlineInterator
> COMP: GCC_XML external project does not use BUILD_EXAMPLES
> BUG: Scanline iterator in STAPLE filter not advanced to next line
> PERF: Use ImageScanlineIterator in ImageAlgorithm::Copy
> PERF: Use iterators into name map for index inputs
> ENH: index can be associated with required input
> PERF: Add global variable of index names in ProcessObject
> COMP: fix unused result warning in ProcessObject
> ENH: Remove names inputs specialized comparison
> DOC: Updated input methods doxygen
> PERF: Use ImageAlgorithm::Copy in JoinSeries filter
> PERF: Change default index i/o prefix to just "_"
> PERF: Use ImageAlgorithm::Copy in CastImageFilter
> COMP: Fix failing implicit conversion from NULL
> BUG: restore gnu aligned attribute
> PERF: ImageAlgorithm::copy to use std::copy for conversion
> PERF: Store indexed outputs in array for constant time access
> COMP: GCC_XML compilation error with type_traits
> BUG: Add unsigned int concept check to LabelVoting filter
> COMP: Disable conversion warning for std::copy in ImageAlgorithm
> BUG: Use correct types for TIFF Tags and buff math
> BUG: Use local var for TIFF va_list parameter
> BUG: Use correct bytes for BigEndian magic number
> COMP: Fix int to char narrowing error and warning
> COMP: Fix int to char narrowing error and warning
> COMP: Fix scanf conversion specification to %u
> COMP: Fix scanf conversion specification for id types
> BUG: Remove extraneous print statement in tiffio
> BUG: Incorrect va_arg type used in TIFF and LSM
> BUG: JPEG2000 bool type in C is now unsigned char
> BUG: add a test to demonstrate ThreadedIteratorPartitioner bug
> BUG: Fix written other magic number in FreeSurferBinaryMeshIO
> COMP: Fix assert in LSM, = in err of ==
> BUG: IteratorPartitioner extra thread don't advance
> BUG: C++ bool is 4 bytes on osx ppc
>
> Brian Helba (11):
> STYLE: Ensure documentation \author tags are parsed
> STYLE: Remove unnecessary overloads in favor of implicit conversion
> PERF: Replace deep copy with const const signature
> ENH: Re-enable LoadPrivateTags option in GDCMImageIO
> STYLE: Slightly refactor ImageFileWriter::Write to simplify logic
> ENH: Always enable Get*FromTag methods in GDCMImageIO
> DOC: Fix misspelling in MorphologyImageFilter
> DOC: Fix misspelling in ObjectMorphologyImageFilter
> STYLE: Remove unnecessary function call in GDCMImageIO
> STYLE: Remove calls to deprecated functionality from DICOM
> Examples / Tests
> ENH: Allow Get*FromTag to accept uppercase hex
>
> Cory Quammen (1):
> COMP: Bumped up minimum required CMake version
>
> Cyrille Faucheux (2):
> ENH: allow the ClampImageFilter to use user-defined bounds (#3016).
> ENH: Move the ClampImageFilter to the ImageIntensity module
> (#3016).
>
> David Cole (4):
> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
> BUG: Do not undefine _WIN32_WINNT
> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
> BUG: Do not undefine _WIN32_WINNT
>
> David Fuentes (2):
> ENH: Allow block matching on diff size images
> ENH: wrapping itkMaskFeaturePointSelectionFilter
> itkBlockMatchingImageFilter
>
> Dirk Padfield (6):
> BUG: CSVFileReader was reading all values as NaN
> DOC: Made AnisotropicDiffusion documentation consistent with code
> ENH: Enable MetaIO to read filenames with spaces using regex
> BUG: CSVFileReader was reading all values as NaN
> ENH: Added m_RequiredFractionOfOverlappingPixels to MaskedFFTNCC
> BUG: SignedMaurerDistanceMap in 4D
>
> Google double-conversion Maintainers (1):
> Google double-conversion (reduced)
>
> Hans Johnson (21):
> COMP: Remove unnecessary BORLAND code
> COMP: Make type conversions explicit/consistent
> PERF: Optimize loop index computations
> COMP: Remove unnecessary BORLAND code
> COMP: Incomplete variable name change.
> COMP: Incorrect warning presented for cppcheck
> STYLE: The FFTW libs should be co-located with ITK
> COMP: Fix robustness of DCMTK internal builds
> ENH: Get function accessible from const objects
> COMP: Missing patch for ITK_FUTURE_LEGACY_REMOVE
> STYLE: Reduce redundant code identified by cpd
> BUG: Return a modifiable object or provide const
> STYLE: Improve SoftwareGuide documentation
> COMP: Type mis-match for comparison operator
> STYLE: Enforce using ITK macros when available
> COMP: Type mis-match for comparison operator
> BUG: ITK_FUTURE_LEGACY_REMOVE must cmake configured
> BUG: Expose BSplineInterpolateImageFunction test
> COMP: Linkage ITK_ABI_EXPORT to ITKCommon_EXPORT
> BUG: itk_tiff.h should not be in itkTIFFImageIO.h
> DOC: Fix line length issues for the SoftwareGuide
>
> Ho Cheung (7):
> BUG: GradientVectorFlow should calculate timestep based on image
> dimension
> STYLE: GradientVectorFlow - Add const correctness
> STYLE: GradientVectorFlow
> PERF: GradientVectorFlow - Remove redundant initializations
> BUG: itkPolyLineParametricPath infinite loop for degenerate paths
> BUG: Fix ITK Path test failures
> BUG: ITK unable to detect number of threads under Unix in recent
> glibc.
>
> ITK Migration V4 (4):
> DOC: Modify ContourMeanDistanceImageFilter comments.
> DOC: Modify MattesMutualInformationImageToImageMetric comments.
> DOC: Modify MaskImageFilter comments.
> DOC: Modify BSplineTransformInitializer comments.
>
> Jan Margeta (1):
> COMP: Added missing header <functional> in
> itkAnchorCloseImageFilter.h
>
> Julien Finet (2):
> ENH: Add unit test to itkThresholdImageFilterTest
> ENH: Add MaskingValue to MaskImageFilter
>
> Julien Malik (2):
> BUG: Remove itkLoad definition in JPEG2000ImageIOFactory
> ENH: Add missing NumericTraits for complex
>
> Julien Michel (2):
> BUG: Fix InverseDisplacementFieldImageFilter bug
> BUG: Fix InverseDisplacementFieldImageFilter bug
>
> Kent Williams (21):
> COMP: Turn on -fpic in options for DCMTK External Project
> BUG: using InputPixelType to hold label count can overflow.
> COMP: Update DCMTK version to incorporate new fixes.
> COMP: Use portable method to find source dir & find DCMTK headers
> COMP: Start using ITKConsortium github to retrieve DCMTK.
> BUG: Regressions with respect to building DCMTK
> COMP: Added patch from Dirk Padfield
> ENH: use find_package(DCMTK NO_MODULE)
> ENH: Add double-conversion library for precise Float output
> COMP: replace in-line access methods with itk Macros
> COMP: The install path for DoubleConversion lib was wrong.
> COMP: removed warnings on Windows due to generic vs excp obj throw.
> COMP: check for this == &rhs as much as possible.
> COMP: Replace memcpy with std::copy in ImportImageContainer.
> COMP: Replace memcpy calls with std::copy
> COMP: Further changes to the use of std::copy_n
> COMP: Add preprocessor symbols to double-conversion for OS X PPC
> COMP: Add DoubleConversion merge from upstream documentation
> BUG: Return of NaN by DiffusionTensor3D::GetFractionalAnisotropy
> BUG: Dicom method for Dir Cosines made non-orthogonal directions
> COMP: Install openjpgDllConfig.h
>
> Kris Zygmunt (1):
> PERF: Provide better default config for patch-based denoiser
>
> Luis Ibanez (1):
> ENH: Maurer for Danielsson in Surface Distance.
>
> Manuel Grizonnet (4):
> BUG: Inconsistency detected by ld.so due to static const string
> BUG: Inconsistency detected by ld.so due to static const string
> BUG: Inconsistency detected by ld.so due to static const string
> BUG: Inconsistency detected by ld.so due to static const string
>
> Marco Feuerstein (1):
> ENH: JPEG IO now writes and reads spacing, similar to the TIFF IO
> (ITK-3023)
>
> Marius Staring (3):
> ENH: expose parameter in Bilateral filter
> PERF: Replace fill and copy with std alternatives
> BUG: B-spline interpolator should use direction
>
> Mark Hiner (1):
> ENH: Add SCIFIOImageIO.
>
> Matthew McCormick (47):
> COMP: Fix wrapping configuration warnings about itkMeshBase, etc.
> COMP: Fix HDF5 unused function for long long on Unix.
> ENH: Bump CMake version numbers to 4.4.0.
> BUG: Remove unused metric test content link.
> COMP: Add DLL to PATH for Python tests on Visual Studio.
> BUG: Do not nullify the DCMTK ExternalProject UPDATE_COMMAND.
> BUG: Fix DCMTK lib_prefix identification.
> COMP: Fix HDF5 unused function for long long on Unix.
> BUG: Remove unused metric test content link.
> COMP: Add DLL to PATH for Python tests on Visual Studio.
> ENH: Bump CMakeLists.txt ITK version to 4.3.1.
> STYLE: Fix errors detected by KWStyleCodeTest.
> COMP: VectorIndexSelectionCastImageFilter extra itk namespace.
> STYLE: Fix alignment in itkMask{Image,Negated}ImageFilter.h
> ENH: Doxygen configuration update to 1.8.3.1.
> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
> DOC: Doxygen detection of DirectionTolerance as private.
> ENH: Get Direction and CoordinateTolerance are const methods.
> BUG: Add missing header to the third party TIFF install.
> COMP: More fixes to mesh wrapping warnings.
> BUG: Temporarily disable Python utility tests.
> COMP: Avoid explicit instantiation and specialization for Array.
> ENH: Add utility script to create JRE tarballs.
> ENH: Use named inputs in BinaryReconstruction filters.
> STYLE: Remove redundant itk namespace.
> DOC: CreateTestDriver srcs should have the .cxx extension.
> COMP: Must reinterpret the pointers to match
> COMP: Fix project linking against ITK that does not use VtkGlue.
> COMP: Fix project linking against ITK that does not use VtkGlue.
> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
> ENH: Bump version in CMakeLists.txt to 4.3.2.
> DOC: Doxygen expansion of itkGetModifiableObjectMacro.
> ENH: Remove unused wrapping code. ITK-3032.
> ENH: Use named inputs in BinaryReconstruction filters.
> COMP: Distance maps filters cannot wrap 1D.
> DOC: Remove reference to MeanDistanceImageFilter.
> STYLE: Fix KWStyle errors.
> STYLE: Remove entries from the old MINC2ImageIO.
> BUG: Remove MINCIO from the default registered modules.
> BUG: Add EXCLUDE_FROM_ALL to ThirdParty/MINC.
> BUG: Include SCIFIO in the auto-registered factories if the module
> is enabled.
> BUG: Visual Studio itkClampImageFilterTest failures.
> STYLE: itkClampImageFilter.hxx in the wrong module.
> COMP: Add _CRT_NO_SECURE_WARNINGS when building GCCXML.
> COMP: Prevent ITK_USE_64BITS_IDS with Wrapping on Windows.
> STYLE: Too many blank lines in itkCastImageFilterTest.cxx.
> COMP: Bump MINC third party to fix warnings.
>
> Nick Tustison (4):
> ENH: Adding masking capabilities with confidence mask option.
> BUG: Masks need to be warped.
> ENH: Permitting access to shrinking per dimension.
> BUG: Valgrind error.
>
> Nicolas Rey (1):
> STYLE: Minor style fixes
>
> Paul Novotny (3):
> COMP: Fix TIFF on big endian systems
> COMP: Build fails with ITK_USE_SYSTEM_TIFF
> COMP: Fix TIFF on big endian systems
>
> Prathamesh Kulkarni (1):
> COMP: QuickViewTest new baseline.
>
> Sean McBride (4):
> STYLE: fixed minor spelling: XCode -> Xcode
> COMP: fixed clang warning about NULL to bool conversion
> BUG: Handle missing Analyze 7.5 flipped directions
> COMP: Handle missing Analyze 7.5 flipped directions
>
> Tim Allman (3):
> DOC: Modify BSplineTransform comments.
> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
> comments.
> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
> comments.
>
> Tom Vercauteren (2):
> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
>
> Vladimir S. FONOV (2):
> ENH: Adding libminc and updating MINC IO support.
> BUG: Making 2D Minc IO work properly
>
> Xiaoxiao Liu (2):
> ENH: Sync python scripts with python3.
> ENH: Sync python scripts with python3.
>
> Yan Xu (1):
> COMP: static cast unsigned int to int
>
>
>
>
> Changes in ITKapps from v4.3.0-apps to v4.4.0-apps:
>
> Bill Lorensen (3):
> COMP: VTK6 API change
> ENH: Add TCL Wrapped examples
> BUG: Missing includes for ITK4.4
>
> Hans Johnson (1):
> COMP: Mac 10.8 fixes were incorporated in FLTK
>
> Jamie Snape (1):
> BUG: Propagate build, linker, and OSX settings to external projects
>
> Matt McCormick (6):
> COMP: Re-add the FLTK patch for some Macs.
> BUG: ITK External build only depends on VTK if being built.
> COMP: Update FLTK SVN configuration.
> ENH: Bump VTK ExternalProject to 5.10.1.
> COMP: Use FLTK zip file stored on Midas3.
> ENH: Bump ITK superbuild version to 4.4.0.
>
> Roland Kwitt (1):
> COMP: Shadowing warning in GLSliceView.h
>
> Stephen R. Aylward (1):
> COMP: Fix FLTK build error on Mac/Clang.
>
> Xiaoxiao Liu (1):
> ENH: Print out accurate image IO error message.
>
>
>
> Changes from v4.3.0 to v4.4.0 from the Jira Issue tracker:
>
> [ITK-3002] - Make itkGetObjectMacro issue compile time warnings
> [ITK-3003] - Add itkGetObjectMacro to the ITK_LEGACY_REMOVE option
> [ITK-3085] - itkBSplineExponentialImageRegistrationTest Timeout on
> RogueResearch11
> [ITK-3086] - QuickViewTest test failure on farsight-mint
> [ITK-3087] - itkLargeMetaImageWriteReadTest4 test failure on
> dash5win7x64.kitware
> [ITK-3088] - itkClampImageFilterTest test failure on lhcp-win7vm2.nlm
> Win32-VS9-Release-Shared VS10-Release-Shared
> [ITK-3089] - itkLSMImageIOTest on eldorado.kitware Ubuntu-g++-4.6.2-Debug
> [ITK-3090] - itkTimeVaryingVelocityFieldImageRegistrationTest test
> failure on eldorado.kitware Ubuntu-g++-4.6.2-Debug
> [ITK-3091] - itkLSMImageIOTest test failure on RogueResearch9,
> Mac10.6-gcc-rel-x86_64-static
> [ITK-3093] - itkTIFFImageIOSpacing test failure on mini0.nlm,
> MacOSX-cross-rosetta
> [ITK-3094] - itkMeshFileReadWriteTest04 test failure on mini0.nlm,
> MacOSX-cross-rosetta
> [ITK-3095] - itkMeshFileReadWriteTest02 test failure on mini0.nlm,
> MacOSX-cross-rosetta
> [ITK-3096] - itkDiscreteGaussianImageFilterTest2 test failure on
> mini0.nlm, MacOSX-cross-rosetta
>
> Bug
> [ITK-2889] - Bug in BSplineInterpolateImageFunction ?
> [ITK-2919] - Build with JOM fails to properly generate ITKTargets.cmake
> [ITK-2943] - Add migration guide related to "itkTestMain.h"
> [ITK-2975] - itk::CastImageFilter creates bad output
> [ITK-2978] - ImageSeriesFileReader MetaDataDictionary Array
> Incorrectly Handles Missing Fields
> [ITK-2983] - ITKVtkGlue not adding VTK_LIBRARIES
> [ITK-2988] - tiff name pollution
> [ITK-2989] - A factor of 1/standard_deviation is missing from the
> kernel pdf estimator in MutualInformationImageToImageMetric
> [ITK-2992] - tif_config.h is not install
> [ITK-2995] - Install tree ITKConfig.cmake is wrong for FFTW
> [ITK-3004] - Direction cosine matrix generated using the images DICOM
> tag "image orientation (patient)" or (0020,0037) is not necessarilly
> orthogonal
> [ITK-3009] - itk::InverseDisplacementFieldImageFilter does not work
> properly
> [ITK-3011] - Maurer for Danielsson in Surface Distance
> [ITK-3012] - ld error on exit when using itkBinaryErodeImageFilter and
> itkBinaryDilateImageFilter
> [ITK-3015] - Modules/IO/PhillipsREC/src/itkPhilipsPar.cxx contains
> nonsense code
> [ITK-3017] - ITK_ABI_EXPORT is used directly when ITKCommon_EXPORT
> should be used
> [ITK-3020] - ImageRegistration2D bug
> [ITK-3021] - itk::ImportImageContainer use of memcpy seen as harmful
> [ITK-3028] - BUG: B-spline interpolator should use direction
> [ITK-3064] - BSplineDeformableTransform writes out a warning every
> time a point in an image is transformed, causes memory allocation
> errors
> [ITK-3065] - TestImportImageContainer cannot handle memory reallocation
> [ITK-3066] - BSplineDeformableTransform::InsideValidRegion icm with
> even spline orders and ITK_USE_CENTERED_PIXEL_COORDINATES_CONSISTENTLY
> [ITK-3068] - Cannot resample a VectorImage
> [ITK-3069] - itkMersenneTwisterRandomVariateGenerator is not thread safe
> [ITK-3070] - IPLCommonImageIO fails to read GE Signa CT file series.
> [ITK-3071] - PolyLineParametricPath converges too slow
> [ITK-3072] - itkTransforms could supply a spatial Jacobian.
> [ITK-3083] - Clean Dashboard for 4.4 release
> [ITK-3118] - inconsistent behavior of all filters derived from
> itk::BinaryFunctorImageFilter
>
> Improvement
> [ITK-2896] - Add missing NumericTraits for complex
> [ITK-2940] - MaskedFFTNormalizedCorrelationImageFilter should be
> templated on MaskType
> [ITK-2964] - CMake warnings about "Perhaps should you turn on more
> WRAP_* options" not helpful.
> [ITK-2977] - itkMatrix sometimes requires extra VNL includes, leading
> to confusing linker errors
> [ITK-2980] - STYLE: Make FEM Get/Set codes use itkMacros wherever possible
> [ITK-2993] - Add Masking value to MaskImageFilter
> [ITK-2996] - Improve speed bilateral filter (itk::BilateralImageFilter)
> [ITK-3001] - itkGetObjectMacro pervasively hides the itkGetConstObjectMacro
> [ITK-3008] - Apply cppcheck to ITK
> [ITK-3016] - Allow the ClampImageFilter to use user-defined bounds
> [ITK-3073] - Const Correctness Warning
>
> New Feature
> [ITK-2985] - Get the internal transforms of the
> itkSyNImageRegistrationMethod
> [ITK-3005] - Add ITK icon to ITK wiki, doc and examples
> Task
> [ITK-2560] - Remove ITK_TEMPLATE_TXX
> [ITK-2979] - Fix doxygen documentation
> [ITK-3032] - Duplicate Source Code Versions of itkImagetoVTKImageFilter
>
>
>
> Enjoy ITK!
> _____________________________________
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>
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