[Insight-users] DeformableMesh3DFilter example doesn't change input

Benjamin Klimczak klimczaks at gmx.de
Sun Aug 16 08:13:06 EDT 2009


Hi Luis,

thanks for looking into my problem.

I have also tried to use the 
itkDeformableSimplexMesh3DGradientConstraintForceFilter.h but I ran into 
strange template compiler errors when I created a simplex mesh, i.e. 
when I used the TriangleMeshToSimplexMeshFilter. The code of this test 
is attached.

Thanks again and best regards,
Benjamin

Luis Ibanez schrieb:
>
> Hi Benjamin,
>
> Thanks for sharing the images.
>
> Please find attached a modified version of the deformable model
> example that will read your mask, extract an isosurface from it and
> pass the data to the deformable model filter.
>
> With this code we have reproduced your observation that the
> surface doesn't propagate with the current parameters.
>
> We are now trying with the filter
> itkDeformableSimplexMesh3DGradientConstraintForceFilter.h
>
> which is more commonly used...
>
>
>
>     Regards,
>
>
>          Luis,
>
>
> -----------------------------------------
> On Thu, Aug 13, 2009 at 9:05 AM, Benjamin Klimczak <klimczaks at gmx.de 
> <mailto:klimczaks at gmx.de>> wrote:
>
>     Hi Luis,
>
>     thank you for the answer and I'm sorry for the late reply.
>     I tried the suggested values from DeformableModel2.cxx in
>     DeformableModel1.cxx, but still nothing is changed by the filter.
>     I have uploaded the data I use here (image and segmentation):
>
>     http://www.lfb.rwth-aachen.de/public/aorta_img.vtk
>     http://www.lfb.rwth-aachen.de/public/aorta_seg.vtk
>
>     I'm working with the MITK btw. and have created the segmentation
>     with its GUI application.
>
>     Any hint why this isn't working would be welcome.
>
>     Thanks a lot,
>     Benjamin
>
>
>     -------- Original-Nachricht --------
>     > Datum: Sat, 8 Aug 2009 11:13:23 -0400
>     > Von: Luis Ibanez <luis.ibanez at kitware.com
>     <mailto:luis.ibanez at kitware.com>>
>     > An: Benjamin Klimczak <klimczaks at gmx.de <mailto:klimczaks at gmx.de>>
>     > CC: insight-users at itk.org <mailto:insight-users at itk.org>
>     > Betreff: Re: [Insight-users] DeformableMesh3DFilter example
>     doesn\'t change   input
>
>     > Hi Benjamin,
>     >
>     > Please look at the suggested values in DeformableModel2.cxx
>     >
>     > If that still doesn't work for you, we may need to have access to
>     > the image that you are using to give you more guidance.
>     >
>     >
>     >      Regards,
>     >
>     >
>     >            Luis
>     >
>     >
>     >
>     -----------------------------------------------------------------------------------------
>     > On Fri, Aug 7, 2009 at 6:01 AM, Benjamin Klimczak
>     <klimczaks at gmx.de <mailto:klimczaks at gmx.de>>
>     > wrote:
>     >
>     > > Hello everybody.
>     > >
>     > > I can't get the DeformableMesh3DFilter from the example
>     > > Examples/Segmentation/DeformableModel1.cxx to change my input
>     data.
>     > Input
>     > > and output mesh are identical. I have tried different input
>     files and
>     > > extreme settings of the parameters but nothing seems to work.
>     > >
>     > > Thanks for any help.
>     > >
>     > > Regards
>     > > Benjamin
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