KitwarePublic - Recent changes [en]

ITK Code Review Check List

Fa11 — Fri, 10 Sep 2010 19:38:51 GMT

← Older revision		Revision as of 19:38, 10 September 2010
Line 59:		Line 59:

	KWStyle -xml ITK.kws.xml itkQuadEdgeMeshTest1.cxx -v		KWStyle -xml ITK.kws.xml itkQuadEdgeMeshTest1.cxx -v
-		+	[http://www.writers.ph/ online writing job philippines]
	== In all the repository ==		== In all the repository ==

KWWidgets/Projects/3DWidgets/Widgets

Fa11 — Fri, 10 Sep 2010 19:37:43 GMT

← Older revision		Revision as of 19:37, 10 September 2010
Line 18:		Line 18:
	{{KWWidgets/Template/Footer}}		{{KWWidgets/Template/Footer}}

-	*Check this out..Best site for quality written essays, term paper, [http://www.research-service.com/custom-research-paper.html research papers], course work, book report and resume writing. All writing services are guaranteed written by professional writers.want to spend a vacation with your family? treat them like you've never done before, make then experience what is a real vacation place, then you might want to try this site. ~~Related Link:[http://www.bluemountaintours.com.au/sites/default.asp '''blue mountain day tours''']~~	+	*Check this out..Best site for quality written essays, term paper, [http://www.research-service.com/custom-research-paper.html research papers], course work, book report and resume writing. All writing services are guaranteed written by professional writers.want to spend a vacation with your family? treat them like you've never done before, make then experience what is a real vacation place, then you might want to try this site.

User:Fa11

Fa11 — Fri, 10 Sep 2010 19:37:26 GMT

New user account

ITK Release 4/Refactoring Level Set Framework/Tcon 2010-09-09

Ibanez — Fri, 10 Sep 2010 16:04:53 GMT

Technical Topics:

← Older revision		Revision as of 16:04, 10 September 2010
(2 intermediate revisions not shown)
Line 24:		Line 24:

	* How to declare whether a Level Set supports streaming or not ?		* How to declare whether a Level Set supports streaming or not ?
		+	* Modularize the level set framework to make easier to build alternative implementations.
		+	* Making Level Sets Multi-Phase from the bottom-up.
		+	* Include visualization helper classes (based on VTK used to monitor the behavior of the level set as it is running)(to be put in a separate ITK Module)
		+	* Implications of this refactoring for GPU Support ?
		+
		+	= Action Items =
		+
		+	* Schedule Joint call with the groups working on GPU.

VTK/Sandbox/Search

Daviddoria — Fri, 10 Sep 2010 15:28:49 GMT

Created page with "<inputbox> type=search searchbuttonlabel=Search </inputbox>"

New page

<inputbox>
type=search
searchbuttonlabel=Search
</inputbox>

ITK Release 4/Refactoring Level Set Framework/Tcon 2010-09-09

Ibanez — Fri, 10 Sep 2010 15:21:21 GMT

Technical Topics:

← Older revision		Revision as of 15:21, 10 September 2010
(3 intermediate revisions not shown)
Line 14:		Line 14:

	= Attendees =		= Attendees =
		+
		+	* Jim Miller
		+	* Ross Whitaker
		+	* Kishore Mosilaganti
		+	* Arnaud Gelas
		+	* Luis Ibanez

	= Technical Topics =		= Technical Topics =
		+
		+	* How to declare whether a Level Set supports streaming or not ?

ITK Release 4/SimpleITK/Advisory Review Board/Prototype Code Discussions

Gabe.hart — Fri, 10 Sep 2010 14:57:18 GMT

User Domain Examples:

← Older revision		Revision as of 14:57, 10 September 2010
(3 intermediate revisions not shown)
Line 22:		Line 22:
	* An open question is how Filter Blocks / Procedural paradigm might support streaming. Based on Jim Miller's suggestion, we could build machinery to stream blocks through a list of filters. This assumes the readers and writers support random access to images on disk.		* An open question is how Filter Blocks / Procedural paradigm might support streaming. Based on Jim Miller's suggestion, we could build machinery to stream blocks through a list of filters. This assumes the readers and writers support random access to images on disk.

-	== Gaussian Blur ==	+	== Simple Examples ==
		+
		+	=== Gaussian Blur ===
	* Open an image		* Open an image
	* Filter the image with a Gaussian blur using sigma = 2		* Filter the image with a Gaussian blur using sigma = 2
Line 140:		Line 142:
	</pre>		</pre>

-	== Image Registration ==	+	=== Image Registration ===
	* Open two images (one fixed, one moving)		* Open two images (one fixed, one moving)
	* Register the moving image to the fixed image using affine registration		* Register the moving image to the fixed image using affine registration
Line 319:		Line 321:
	</pre>		</pre>

-	== Level Set ==	+	=== Level Set ===

-	== Region Growing ==	+	=== Region Growing ===
	* Open an image		* Open an image
	* Set up a set of seed points		* Set up a set of seed points
Line 416:		Line 418:
	</pre>		</pre>

-	== Watershed ==	+	=== Watershed ===
		+
		+	=== QuadEdgeMesh ===
		+
		+	== User Domain Examples ==
		+
		+	This section provides a set of examples for simple applications from a number of target user groups. The goal is to present the ARB with targeted examples that show non-trivial applications specific to each target community.
		+
		+	=== Microscopy ===
		+
		+	=== Orfeo Toolbox ===

-	== ~~QuadEdgeMesh~~ ==	+	=== Education ===

User:Pedrodaquino

Pedrodaquino — Fri, 10 Sep 2010 14:21:35 GMT

New user account

VTK/Sandbox

Daviddoria — Fri, 10 Sep 2010 14:18:29 GMT

Blanked the page

← Older revision		Revision as of 14:18, 10 September 2010
Line 1:		Line 1:
-	~~==TEST==~~

-	~~{{SourceOpen}}~~
-	~~{{CHECKVTKCMakeLists\|Var1\|Var2}}~~
-
-
-	~~<source lang="cmake"> cmake_minimum_required(VERSION 2.6)~~
-	~~PROJECT(Var1)~~
-	~~FIND_PACKAGE(VTK REQUIRED) INCLUDE(${VTK_USE_FILE})~~
-	~~ADD_EXECUTABLE(Var1 Var1.cxx) TARGET_LINK_LIBRARIES(Var1 Var2)~~
-	~~</source>~~
-
-
-
-	~~==Ratings==~~
-	~~{{#w4grb_rate:[page name]}}~~

VTK/Sandbox/UseCMakeListsTemplate

Daviddoria — Fri, 10 Sep 2010 14:18:06 GMT

Created page with "{{VTKCMakeLists|Thing1|Thing2}}"

New page

VTK/Sandbox

Daviddoria — Fri, 10 Sep 2010 14:17:55 GMT

← Older revision		Revision as of 14:17, 10 September 2010
Line 1:		Line 1:
-	~~{{VTKCMakeLists\|Thing1\|Thing2}}~~
-
-	~~{{VTKSimpleTemplate\| there \| World}}~~
-
-
	==TEST==		==TEST==

ITK Release 4/SimpleITK/Advisory Review Board/Prototype Code Discussions

Gabe.hart — Fri, 10 Sep 2010 13:54:39 GMT

VTK/Sandbox/Transclusion

Daviddoria — Fri, 10 Sep 2010 13:50:17 GMT

Created page with "{{VTK/Sandbox/PageToTransclude}}"

New page

VTK/Sandbox/PageToTransclude

Daviddoria — Fri, 10 Sep 2010 13:50:07 GMT

Created page with "Some text here."

New page

Some text here.

VTK/Examples/Cxx/Meshes/QuadricDecimation

Daviddoria — Fri, 10 Sep 2010 13:47:25 GMT

Created page with "==QuadricDecimation.cxx== <source lang="cpp"> #include <vtkPolyData.h> #include <vtkSphereSource.h> #include <vtkQuadricDecimation.h> #include <vtkSmartPointer.h> #include <vtkPo..."

New page

==QuadricDecimation.cxx==
<source lang="cpp">
#include <vtkPolyData.h>
#include <vtkSphereSource.h>
#include <vtkQuadricDecimation.h>
#include <vtkSmartPointer.h>
#include <vtkPolyDataMapper.h>
#include <vtkProperty.h>
#include <vtkRenderWindow.h>
#include <vtkRenderWindowInteractor.h>
#include <vtkRenderer.h>

int main(int, char *[])
{
vtkSmartPointer<vtkSphereSource> sphereSource =
vtkSmartPointer<vtkSphereSource>::New();
sphereSource->Update();

vtkSmartPointer<vtkPolyData> input =
vtkSmartPointer<vtkPolyData>::New();
input->ShallowCopy(sphereSource->GetOutput());

std::cout << "Before decimation" << std::endl << "------------" << std::endl;
std::cout << "There are " << input->GetNumberOfPoints() << " points." << std::endl;
std::cout << "There are " << input->GetNumberOfPolys() << " polygons." << std::endl;

vtkSmartPointer<vtkQuadricDecimation> decimate =
vtkSmartPointer<vtkQuadricDecimation>::New();
decimate->SetInputConnection(input->GetProducerPort());
decimate->Update();

vtkSmartPointer<vtkPolyData> decimated =
vtkSmartPointer<vtkPolyData>::New();
decimated->ShallowCopy(decimate->GetOutput());

std::cout << "After decimation" << vtkstd::endl << "------------" << std::endl;

std::cout << "There are " << decimated->GetNumberOfPoints() << " points." << std::endl;
std::cout << "There are " << decimated->GetNumberOfPolys() << " polygons." << std::endl;

vtkSmartPointer<vtkPolyDataMapper> inputMapper =
vtkSmartPointer<vtkPolyDataMapper>::New();
inputMapper->SetInputConnection(input->GetProducerPort());
vtkSmartPointer<vtkActor> inputActor =
vtkSmartPointer<vtkActor>::New();
inputActor->SetMapper(inputMapper);

vtkSmartPointer<vtkPolyDataMapper> decimatedMapper =
vtkSmartPointer<vtkPolyDataMapper>::New();
decimatedMapper->SetInputConnection(decimated->GetProducerPort());
vtkSmartPointer<vtkActor> decimatedActor =
vtkSmartPointer<vtkActor>::New();
decimatedActor->SetMapper(decimatedMapper);

// There will be one render window
vtkSmartPointer<vtkRenderWindow> renderWindow =
vtkSmartPointer<vtkRenderWindow>::New();
renderWindow->SetSize(600, 300);

// And one interactor
vtkSmartPointer<vtkRenderWindowInteractor> interactor =
vtkSmartPointer<vtkRenderWindowInteractor>::New();
interactor->SetRenderWindow(renderWindow);

// Define viewport ranges
// (xmin, ymin, xmax, ymax)
double leftViewport[4] = {0.0, 0.0, 0.5, 1.0};
double rightViewport[4] = {0.5, 0.0, 1.0, 1.0};

// Setup both renderers
vtkSmartPointer<vtkRenderer> leftRenderer =
vtkSmartPointer<vtkRenderer>::New();
renderWindow->AddRenderer(leftRenderer);
leftRenderer->SetViewport(leftViewport);
leftRenderer->SetBackground(.6, .5, .4);

vtkSmartPointer<vtkRenderer> rightRenderer =
vtkSmartPointer<vtkRenderer>::New();
renderWindow->AddRenderer(rightRenderer);
rightRenderer->SetViewport(rightViewport);
rightRenderer->SetBackground(.4, .5, .6);

// Add the sphere to the left and the cube to the right
leftRenderer->AddActor(inputActor);
rightRenderer->AddActor(decimatedActor);

leftRenderer->ResetCamera();

rightRenderer->ResetCamera();

renderWindow->Render();
interactor->Start();

return EXIT_SUCCESS;
}

</source>

==CMakeLists.txt==
<source lang="cmake">
cmake_minimum_required(VERSION 2.6)

PROJECT(QuadricDecimation)

FIND_PACKAGE(VTK REQUIRED)
INCLUDE(${VTK_USE_FILE})

ADD_EXECUTABLE(QuadricDecimation QuadricDecimation.cxx)
TARGET_LINK_LIBRARIES(QuadricDecimation vtkHybrid)
</source>

VTK/Examples/Cxx/Meshes/QuadricClustering

Daviddoria — Fri, 10 Sep 2010 13:46:13 GMT

Created page with "==QuadricClustering.cxx== <source lang="cpp"> #include <vtkPolyData.h> #include <vtkSphereSource.h> #include <vtkQuadricClustering.h> #include <vtkSmartPointer.h> #include <vtkPo..."

New page

==QuadricClustering.cxx==
<source lang="cpp">
#include <vtkPolyData.h>
#include <vtkSphereSource.h>
#include <vtkQuadricClustering.h>
#include <vtkSmartPointer.h>
#include <vtkPolyDataMapper.h>
#include <vtkProperty.h>
#include <vtkRenderWindow.h>
#include <vtkRenderWindowInteractor.h>
#include <vtkRenderer.h>

int main(int, char *[])
{
vtkSmartPointer<vtkSphereSource> sphereSource =
vtkSmartPointer<vtkSphereSource>::New();
sphereSource->Update();

vtkSmartPointer<vtkPolyData> input =
vtkSmartPointer<vtkPolyData>::New();
input->ShallowCopy(sphereSource->GetOutput());

std::cout << "Before decimation" << std::endl << "------------" << std::endl;
std::cout << "There are " << input->GetNumberOfPoints() << " points." << std::endl;
std::cout << "There are " << input->GetNumberOfPolys() << " polygons." << std::endl;

vtkSmartPointer<vtkQuadricClustering> decimate =
vtkSmartPointer<vtkQuadricClustering>::New();
decimate->SetInputConnection(input->GetProducerPort());
decimate->Update();

vtkSmartPointer<vtkPolyData> decimated =
vtkSmartPointer<vtkPolyData>::New();
decimated->ShallowCopy(decimate->GetOutput());

std::cout << "After decimation" << vtkstd::endl << "------------" << std::endl;

std::cout << "There are " << decimated->GetNumberOfPoints() << " points." << std::endl;
std::cout << "There are " << decimated->GetNumberOfPolys() << " polygons." << std::endl;

vtkSmartPointer<vtkPolyDataMapper> inputMapper =
vtkSmartPointer<vtkPolyDataMapper>::New();
inputMapper->SetInputConnection(input->GetProducerPort());
vtkSmartPointer<vtkActor> inputActor =
vtkSmartPointer<vtkActor>::New();
inputActor->SetMapper(inputMapper);

vtkSmartPointer<vtkPolyDataMapper> decimatedMapper =
vtkSmartPointer<vtkPolyDataMapper>::New();
decimatedMapper->SetInputConnection(decimated->GetProducerPort());
vtkSmartPointer<vtkActor> decimatedActor =
vtkSmartPointer<vtkActor>::New();
decimatedActor->SetMapper(decimatedMapper);

// There will be one render window
vtkSmartPointer<vtkRenderWindow> renderWindow =
vtkSmartPointer<vtkRenderWindow>::New();
renderWindow->SetSize(600, 300);

// And one interactor
vtkSmartPointer<vtkRenderWindowInteractor> interactor =
vtkSmartPointer<vtkRenderWindowInteractor>::New();
interactor->SetRenderWindow(renderWindow);

// Define viewport ranges
// (xmin, ymin, xmax, ymax)
double leftViewport[4] = {0.0, 0.0, 0.5, 1.0};
double rightViewport[4] = {0.5, 0.0, 1.0, 1.0};

// Setup both renderers
vtkSmartPointer<vtkRenderer> leftRenderer =
vtkSmartPointer<vtkRenderer>::New();
renderWindow->AddRenderer(leftRenderer);
leftRenderer->SetViewport(leftViewport);
leftRenderer->SetBackground(.6, .5, .4);

vtkSmartPointer<vtkRenderer> rightRenderer =
vtkSmartPointer<vtkRenderer>::New();
renderWindow->AddRenderer(rightRenderer);
rightRenderer->SetViewport(rightViewport);
rightRenderer->SetBackground(.4, .5, .6);

// Add the sphere to the left and the cube to the right
leftRenderer->AddActor(inputActor);
rightRenderer->AddActor(decimatedActor);

leftRenderer->ResetCamera();

rightRenderer->ResetCamera();

renderWindow->Render();
interactor->Start();

return EXIT_SUCCESS;
}

</source>

==CMakeLists.txt==
<source lang="cmake">
cmake_minimum_required(VERSION 2.6)

PROJECT(QuadricClustering)

FIND_PACKAGE(VTK REQUIRED)
INCLUDE(${VTK_USE_FILE})

ADD_EXECUTABLE(QuadricClustering QuadricClustering.cxx)
TARGET_LINK_LIBRARIES(QuadricClustering vtkHybrid)
</source>

VTK/Examples/Cxx

Daviddoria — Fri, 10 Sep 2010 13:45:34 GMT

Working with Meshes:

← Older revision		Revision as of 13:45, 10 September 2010
Line 415:		Line 415:
	\|-		\|-
	\| [[VTK/Examples/Cxx/Meshes/Decimation\|Decimation]] \|\| {{VTKDoxygenURL\|vtkDecimatePro}} \|\| Reduce the number of triangles in a mesh.		\| [[VTK/Examples/Cxx/Meshes/Decimation\|Decimation]] \|\| {{VTKDoxygenURL\|vtkDecimatePro}} \|\| Reduce the number of triangles in a mesh.
		+	\|-
		+	\| [[VTK/Examples/Cxx/Meshes/QuadricDecimation\|Decimation (quadric decimation)]] \|\| {{VTKDoxygenURL\|vtkQuadricDecimation}} \|\| Reduce the number of triangles in a mesh.
		+	\|-
		+	\| [[VTK/Examples/Cxx/Meshes/QuadricClustering\|Decimation (quadric clustering)]] \|\| {{VTKDoxygenURL\|vtkQuadricClustering}} \|\| Reduce the number of triangles in a mesh.
	\|-		\|-
	\| [[VTK/Examples/Cxx/Meshes/Subdivision\|Subdivision]] \|\| {{VTKDoxygenURL\|vtkButterflySubdivisionFilter}}, {{VTKDoxygenURL\|vtkLoopSubdivisionFilter}}, {{VTKDoxygenURL\|vtkLinearSubdivisionFilter}} \|\| Increase the number of triangles in a mesh.		\| [[VTK/Examples/Cxx/Meshes/Subdivision\|Subdivision]] \|\| {{VTKDoxygenURL\|vtkButterflySubdivisionFilter}}, {{VTKDoxygenURL\|vtkLoopSubdivisionFilter}}, {{VTKDoxygenURL\|vtkLinearSubdivisionFilter}} \|\| Increase the number of triangles in a mesh.

VTK/Examples/Cxx/SimpleOperations/DistanceBetweenPoints

Daviddoria — Fri, 10 Sep 2010 12:19:44 GMT

← Older revision		Revision as of 12:19, 10 September 2010
(One intermediate revision not shown)
Line 2:		Line 2:
	This example finds the squared distance and the Euclidean distance between two 3D points.		This example finds the squared distance and the Euclidean distance between two 3D points.

-	==Distance.cxx==	+
		+	==[http://gitorious.org/vtkwikiexamples/wikiexamples/blobs/raw/master/Cxx/SimpleOperations/Distance.cxx Distance.cxx]==
	<source lang="cpp">		<source lang="cpp">
	#include <vtkMath.h>		#include <vtkMath.h>
Line 8:		Line 9:
	int main(int, char *[])		int main(int, char *[])
	{		{
-	//Create two points.	+	// Create two points.
	double p0[3] = {0.0, 0.0, 0.0};		double p0[3] = {0.0, 0.0, 0.0};
	double p1[3] = {1.0, 1.0, 1.0};		double p1[3] = {1.0, 1.0, 1.0};

-	//Find the squared distance between the points.	+	// Find the squared distance between the points.
	double squaredDistance = vtkMath::Distance2BetweenPoints(p0, p1);		double squaredDistance = vtkMath::Distance2BetweenPoints(p0, p1);

-	//Take the square root to get the Euclidean distance between the points.	+	// Take the square root to get the Euclidean distance between the points.
	double distance = sqrt(squaredDistance);		double distance = sqrt(squaredDistance);

-	//Output the results.	+	// Output the results.
	std::cout << "SquaredDistance = " << squaredDistance << std::endl;		std::cout << "SquaredDistance = " << squaredDistance << std::endl;
	std::cout << "Distance = " << distance << std::endl;		std::cout << "Distance = " << distance << std::endl;

CMake:Module Maintainers

Brad.king — Fri, 10 Sep 2010 12:00:52 GMT

List:

← Older revision		Revision as of 12:00, 10 September 2010
Line 28:		Line 28:
	* NOBODY!!! Please volunteer if you are able and willing. Need new maintainers for these modules:		* NOBODY!!! Please volunteer if you are able and willing. Need new maintainers for these modules:
	** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindMPI.cmake FindMPI]		** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindMPI.cmake FindMPI]
-	** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindSubversion.cmake FindSubversion]

	* Miguel A. Figueroa Villanueva, miguelf at ieee dot org		* Miguel A. Figueroa Villanueva, miguelf at ieee dot org
Line 90:		Line 89:
	*** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindosgUtil.cmake FindosgUtil]		*** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindosgUtil.cmake FindosgUtil]
	*** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindosgViewer.cmake FindosgViewer]		*** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindosgViewer.cmake FindosgViewer]
		+
		+	* Marcel Loose, loose at astron dot nl
		+	** [http://cmake.org/gitweb?p=cmake.git;a=blob;f=Modules/FindSubversion.cmake FindSubversion]

	* Matt Leotta, matt.leotta at gmail dot com		* Matt Leotta, matt.leotta at gmail dot com

VTK/Examples/Developers/Errors

Daviddoria — Thu, 09 Sep 2010 14:34:18 GMT

← Older revision		Revision as of 14:34, 9 September 2010
Line 12:		Line 12:
	TestClass()		TestClass()
	{		{
-	vtkErrorMacro("Test error.");	+	vtkErrorMacro(<< "Test error.");
	}		}
	};		};

File:VTK Examples Baseline Visualization TestAxesIndicator.png

Lorensen — Thu, 09 Sep 2010 12:19:54 GMT

uploaded a new version of "[[File:VTK Examples Baseline Visualization TestAxesIndicator.png]]"

VTK/Examples/Cxx/Visualization/DisplayCoordinateAxes

Lorensen — Thu, 09 Sep 2010 12:17:56 GMT

Changed background

← Older revision		Revision as of 12:17, 9 September 2010
Line 50:		Line 50:
	// Add the actors to the scene		// Add the actors to the scene
	renderer->AddActor(actor);		renderer->AddActor(actor);
-	renderer->SetBackground(1,1,1); ~~// Background color white~~	+	renderer->SetBackground(.2, .3, .4);

	vtkSmartPointer<vtkAxesActor> axes =		vtkSmartPointer<vtkAxesActor> axes =
Line 62:		Line 62:
	widget->SetViewport( 0.0, 0.0, 0.4, 0.4 );		widget->SetViewport( 0.0, 0.0, 0.4, 0.4 );
	widget->SetEnabled( 1 );		widget->SetEnabled( 1 );
-	~~widget->InteractiveOff();~~
	widget->InteractiveOn();		widget->InteractiveOn();

VTK/Examples/Cxx/Widgets/OrientationMarkerWidget

Lorensen — Thu, 09 Sep 2010 12:16:49 GMT

Added link to bunny data.

← Older revision		Revision as of 12:16, 9 September 2010
Line 1:		Line 1:
	<div class="floatright">[[File:VTK_Examples_Baseline_Widgets_TestOrientationMarkerWidget.png]]</div>		<div class="floatright">[[File:VTK_Examples_Baseline_Widgets_TestOrientationMarkerWidget.png]]</div>
-	This example uses a polydata as an orientation icon.	+	This example uses a polydata as an orientation icon. You can get the bunny data [[http://gitorious.org/vtkwikiexamples/wikiexamples/blobs/raw/master/Testing/Data/Bunny.vtp here]].
	==OrientationMarkerWidget.cxx==		==OrientationMarkerWidget.cxx==
	<source lang="cpp">		<source lang="cpp">

VTK/Examples/Cxx/Visualization/SceneBounds

Lorensen — Thu, 09 Sep 2010 03:25:39 GMT

← Older revision		Revision as of 03:25, 9 September 2010
Line 1:		Line 1:
		+	<div class="floatright">[[File:VTK_Examples_Baseline_Visualization_TestSceneBounds.png]]</div>
	==SceneBounds.cxx==		==SceneBounds.cxx==
	<source lang="cpp">		<source lang="cpp">

VTK/Examples/Cxx/IO/XGMLReader

Lorensen — Thu, 09 Sep 2010 03:24:08 GMT

moved [[VTK/Examples/Cxx/IO/XGMLReader]] to [[VTK/Examples/Cxx/InfoVis/XGMLReader]]

VTK/Examples/Cxx/IO/XGMLReader

Daviddoria — Wed, 08 Sep 2010 19:12:45 GMT

Created page with "You can test this with VTKData/Data/Infovis/fsm.gml. ==XGMLReader.cxx== <source lang="cpp"> #include <vtkPolyData.h> #include <vtkXGMLReader.h> #include <vtkSmartPointer.h> #inc..."

New page

You can test this with VTKData/Data/Infovis/fsm.gml.

==XGMLReader.cxx==
<source lang="cpp">
#include <vtkPolyData.h>
#include <vtkXGMLReader.h>
#include <vtkSmartPointer.h>
#include <vtkUndirectedGraph.h>
#include <vtkGraphLayoutStrategy.h>
#include <vtkGraphLayoutView.h>
#include <vtkRenderWindowInteractor.h>
#include <vtkSimple2DLayoutStrategy.h>

int main(int argc, char *argv[])
{
if ( argc != 2 )
{
std::cout << "Required parameters: Filename" << std::endl;
return EXIT_FAILURE;
}

std::string inputFilename = argv[1];

vtkSmartPointer<vtkXGMLReader> reader =
vtkSmartPointer<vtkXGMLReader>::New();
reader->SetFileName(inputFilename.c_str());
reader->Update();

vtkUndirectedGraph* g = reader->GetOutput();

vtkSmartPointer<vtkGraphLayoutView> graphLayoutView =
vtkSmartPointer<vtkGraphLayoutView>::New();
graphLayoutView->AddRepresentationFromInput(g);
graphLayoutView->SetLayoutStrategy("Simple 2D");
graphLayoutView->ResetCamera();
graphLayoutView->Render();

graphLayoutView->GetInteractor()->Start();

return EXIT_SUCCESS;
}

</source>

==CMakeLists.txt==
<source lang="cmake">
cmake_minimum_required(VERSION 2.6)

PROJECT(XGMLReader)

FIND_PACKAGE(VTK REQUIRED)
INCLUDE(${VTK_USE_FILE})

ADD_EXECUTABLE(XGMLReader XGMLReader.cxx)
TARGET_LINK_LIBRARIES(XGMLReader vtkHybrid vtkInfovis vtkViews)

</source>

VTK/Examples/Cxx

Daviddoria — Wed, 08 Sep 2010 19:11:43 GMT

Input and Output:

← Older revision		Revision as of 19:11, 8 September 2010
Line 22:		Line 22:

	==Input and Output==		==Input and Output==
		+	===Graph Formats===
		+
	===3D File Formats===		===3D File Formats===
		+	{{VTKExamplesTable}}
		+	\|-
		+	\| [[VTK/Examples/Cxx/IO/XGMLReader \| Read a .gml file]] \|\| {{VTKDoxygenURL\|vtkXGMLReader}} \|\|
		+	\|}

	====Standard Formats====		====Standard Formats====

VTK/Examples/Python/Graphs/VisualizeGraph

Daviddoria — Wed, 08 Sep 2010 19:04:05 GMT

Created page with "* Contributed by Jim McCusker * Note: AddEdge() is not enabled through python, but AddGraphEdge() is. ==VisualizeGraph.py== <source lang="python"> import vtk g = vtk.vtkMutabl..."

New page

* Contributed by Jim McCusker

* Note: AddEdge() is not enabled through python, but AddGraphEdge() is.

==VisualizeGraph.py==
<source lang="python">
import vtk

g = vtk.vtkMutableDirectedGraph()

v1 = g.AddVertex()
v2 = g.AddVertex()

g.AddGraphEdge(v1,v2)
g.AddGraphEdge(v1,v2)

graphLayoutView = vtk.vtkGraphLayoutView()
graphLayoutView.AddRepresentationFromInput(g)
graphLayoutView.SetLayoutStrategy("Simple 2D")
graphLayoutView.ResetCamera()
graphLayoutView.Render()

graphLayoutView.GetLayoutStrategy().SetRandomSeed(0)

graphLayoutView.GetInteractor().Start()
</source>

VTK/Examples/Python

Daviddoria — Wed, 08 Sep 2010 19:03:10 GMT

← Older revision		Revision as of 19:03, 8 September 2010
(2 intermediate revisions not shown)
Line 1:		Line 1:
	It would be appreciated if there are any Python VTK experts who could convert any of the [[VTK/Examples/Cxx\|c++ examples]] to Python!		It would be appreciated if there are any Python VTK experts who could convert any of the [[VTK/Examples/Cxx\|c++ examples]] to Python!

-	===Simple Operations===	+	=Simple Operations=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 9:		Line 9:
	\|}		\|}

-	===Input and Output===	+	=Input and Output=
-	====Output====	+	==Output==

-	====Input====	+	==Input==
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 20:		Line 20:
	\|}		\|}

-	===Working with Arrays===	+	=Working with Arrays=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 28:		Line 28:
	\|}		\|}

-	===Geometric Objects~~===~~	+	=Geometric Objects=
-		+
-	~~==Save to file==~~	+
-		+
-	~~==Display on screen=~~=	+
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 62:		Line 58:
	\|}		\|}

-	===Working with PolyData===	+	=Working with PolyData=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 92:		Line 88:
	\|}		\|}

-	===Miscellaneous===	+	=Miscellaneous=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 112:		Line 108:
	\|}		\|}

-	===Visualization===	+	=Visualization=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 142:		Line 138:
	\|}		\|}

-	===Working with vtkImageData===	+	=Working with vtkImageData=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 148:		Line 144:
	\|}		\|}

-	===Infovis===	+	=Graphs=
		+	{{ExamplesTable}}
		+	\|-
		+	\| [[VTK/Examples/Python/Graphs/VisualizeGraph \| Create and visualize a graph]] \|\| {{DoxygenURL\|vtkMutableDirectedGraph}}, {{DoxygenURL\|vtkGraphLayoutView}} \|\|
		+	\|}
		+
		+	=Infovis=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-
Line 158:		Line 160:
	\|}		\|}

-	===Broken/Missing Examples===	+	=Broken/Missing Examples=

-	===Broken/Missing Python Functionality===	+	=Broken/Missing Python Functionality=
	{{ExamplesTable}}		{{ExamplesTable}}
	\|-		\|-

TubeTK/Developer/Python

Danielle.pace — Wed, 08 Sep 2010 18:50:47 GMT

Created page with "= Motivation = * Allow users to easily create and/or customize TubeTK functionality ** Ex: Create your own heuristic for automatic seed point generation for use by TubeTK's cente..."

New page

= Motivation =
* Allow users to easily create and/or customize TubeTK functionality
** Ex: Create your own heuristic for automatic seed point generation for use by TubeTK's centerline extraction segmentation algorithm
* Allow fast programming/prototyping using TubeTK

= Options =

== TubeTK ==
* Wrap all of TubeTK into python
* Source the user's python scripts from TubeTK's C++ code

== TubeTK in Slicer ==
* [http://www.slicer.org/slicerWiki/index.php/Slicer3:Python 3D Slicer's python page]
* Command-line (XML) python modules:
** Specify user interface and a single "execute" function (called when the Apply button is clicked)
** Can access Slicer's global objects, MRML tree, and other command-line modules (even if they are not python modules)
** Unfortunately, not interactive or dynamic
* Scripted python modules:
** Can be interactive and dynamic (ex. PythonGADScriptedModuleGUI, as explained on the last slides of the [http://www.slicer.org/slicerWiki/images/2/2d/ProjectWeekBreakout2009_SlicerPython.pdf Slicer Python breakout session in Salt Lake City, Winter Project Week 2009] by Luca Antiga)
** Heavily dependent on Slicer
* Ideally, would want most functionality within python scripts that can be run with or without Slicer
** Create Slicer-independent python script, and call it from a small python script? Ex. [http://www.slicer.org/slicerWiki/index.php/Slicer3:Execution_Model_Documentation:Python#PythonScript.py PythonScript.py]

TubeTK/Developer

Danielle.pace — Wed, 08 Sep 2010 18:01:26 GMT

← Older revision		Revision as of 18:01, 8 September 2010
Line 1:		Line 1:
-	* [[~~tubetk~~/Developer/Python \| Preliminary ideas for python in TubeTK]]	+	* [[TubeTK/Developer/Python \| Preliminary ideas for python in TubeTK]]

TubeTK

Danielle.pace — Wed, 08 Sep 2010 18:01:04 GMT

← Older revision		Revision as of 18:01, 8 September 2010
Line 44:		Line 44:
	* [[TubeTK/Events \| Events and meetings]]		* [[TubeTK/Events \| Events and meetings]]
	* [https://www.kitware.com/CDash/index.php?project=TubeTK TubeTK Dashboard]		* [https://www.kitware.com/CDash/index.php?project=TubeTK TubeTK Dashboard]
-	* [[~~tubetk~~/Developer \| Developer page]]	+	* [[TubeTK/Developer \| Developer page]]

	== Users ==		== Users ==

Tubetk/Developer

Danielle.pace — Wed, 08 Sep 2010 17:59:47 GMT

moved [[Tubetk/Developer]] to [[TubeTK/Developer]]

Tubetk/Developer

Danielle.pace — Wed, 08 Sep 2010 17:58:50 GMT

Created page with "* Preliminary ideas for python in TubeTK"

New page

* [[tubetk/Developer/Python | Preliminary ideas for python in TubeTK]]

TubeTK

Danielle.pace — Wed, 08 Sep 2010 17:56:14 GMT

← Older revision		Revision as of 17:56, 8 September 2010
Line 44:		Line 44:
	* [[TubeTK/Events \| Events and meetings]]		* [[TubeTK/Events \| Events and meetings]]
	* [https://www.kitware.com/CDash/index.php?project=TubeTK TubeTK Dashboard]		* [https://www.kitware.com/CDash/index.php?project=TubeTK TubeTK Dashboard]
		+	* [[tubetk/Developer \| Developer page]]

	== Users ==		== Users ==

ITK Release 4/SimpleITK

Ibanez — Wed, 08 Sep 2010 15:39:07 GMT

TCons:

← Older revision		Revision as of 15:39, 8 September 2010
Line 54:		Line 54:
	= TCons =		= TCons =

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 15\|7/15/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 09 07\|9/07/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 ~~07 16~~\|7/16/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 26\|8/26/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 22\|7/22/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 17\|8/17/2010]]
-		+
-	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 12\|8/12/2010]]	+

	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 13\|8/13/2010]]		* [[ITK_Release_4/SimpleITK/Tcon 2010 08 13\|8/13/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 17\|8/17/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 12\|8/12/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 ~~08 26~~\|8/26/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 22\|7/22/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 09 07\|9/07/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 16\|7/16/2010]]
		+
		+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 15\|7/15/2010]]

ITK Release 4/SimpleITK/Tcon 2010 09 07

Ibanez — Wed, 08 Sep 2010 15:37:58 GMT

Created page with "= Attendees = * Dan Blezek * Alex Gouaillard * Harvey Cline * Gabe Hart * Luis Ibanez = Topics = * Discussed the organization of the ARB * Talked about the symbiosis between ..."

New page

= Attendees =

* Dan Blezek
* Alex Gouaillard
* Harvey Cline
* Gabe Hart
* Luis Ibanez

= Topics =

* Discussed the organization of the ARB
* Talked about the symbiosis between WrapITK and SimpleITK
** Lessons learned in WrapITK
** Techniques that can be reused
* Reviewed some of the prototype examples
* Discussed potential mechanisms for gathering feedback from the ARB
** Wiki pages with tables
** Gerrit (as code reviews)
** Wordpress (as a Blog style)
* Agreed in organizing more examples
** Reuse example cases from the MICCAI tutorial on microscopy image analysis
** Compare examples with other libraries such as OpenCV

VTK/Examples/Cxx/Graphs/ConstructGraph

Daviddoria — Wed, 08 Sep 2010 15:36:25 GMT

vtkViews was needed

← Older revision		Revision as of 15:36, 8 September 2010
Line 57:		Line 57:

	ADD_EXECUTABLE(ConstructGraph ConstructGraph.cpp)		ADD_EXECUTABLE(ConstructGraph ConstructGraph.cpp)
-	TARGET_LINK_LIBRARIES(ConstructGraph vtkHybrid)	+	TARGET_LINK_LIBRARIES(ConstructGraph vtkHybrid vtkViews)
-		+

	</source>		</source>

ITK Release 4/SimpleITK

Ibanez — Wed, 08 Sep 2010 15:34:15 GMT

TCons:

← Older revision		Revision as of 15:34, 8 September 2010
Line 67:		Line 67:

	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 26\|8/26/2010]]		* [[ITK_Release_4/SimpleITK/Tcon 2010 08 26\|8/26/2010]]
		+
		+	* [[ITK_Release_4/SimpleITK/Tcon 2010 09 07\|9/07/2010]]

← Older revision		Revision as of 15:39, 8 September 2010
Line 54:		Line 54:
	= TCons =		= TCons =

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 15\|7/15/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 09 07\|9/07/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 ~~07 16~~\|7/16/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 26\|8/26/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 22\|7/22/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 17\|8/17/2010]]
-		+
-	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 12\|8/12/2010]]	+

	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 13\|8/13/2010]]		* [[ITK_Release_4/SimpleITK/Tcon 2010 08 13\|8/13/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 17\|8/17/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 08 12\|8/12/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 ~~08 26~~\|8/26/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 22\|7/22/2010]]

-	* [[ITK_Release_4/SimpleITK/Tcon 2010 09 07\|9/07/2010]]	+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 16\|7/16/2010]]
		+
		+	* [[ITK_Release_4/SimpleITK/Tcon 2010 07 15\|7/15/2010]]

← Older revision		Revision as of 13:54, 10 September 2010
Line 1:		Line 1:
	== General Design Questions ==		== General Design Questions ==

-	* Procedural -vs- Pipelined:	+	==== Procedural -vs- Pipelined ====
-	** The '''procedural''' model sees each filter as an independent function that takes a set of inputs and produces an output.	+	* The '''procedural''' model sees each filter as an independent function that takes a set of inputs and produces an output.
-	*** Could either be purely functional (static functions, no need to instantiate a filter) or set up with blocks of code for each filter	+	** Could either be purely functional (static functions, no need to instantiate a filter) or set up with blocks of code for each filter
-	*** Generally easier to learn than the pipelined model (similar to Matlab's style)	+	** Generally easier to learn than the pipelined model (similar to Matlab's style)
-	** The '''pipelined''' model sees each filter as a step along an algorithm pipeline that can take the output of a previous filter, modify it, and pass it off to the next filter in line.	+	* The '''pipelined''' model sees each filter as a step along an algorithm pipeline that can take the output of a previous filter, modify it, and pass it off to the next filter in line.
-	*** Largely a mirror of the current ITK implementation with the templates hidden	+	** Largely a mirror of the current ITK implementation with the templates hidden
-	*** Can be used to stream large images	+	** Can be used to stream large images

-	* Enums -vs- Parameter methods:	+	==== Enums -vs- Parameter methods ====
-	** This refers to the convention for setting filter parameters	+	* This refers to the convention for setting filter parameters
-	** '''enums''' => filter.SetParameter("name", val);	+	* '''enums''' => filter.SetParameter("name", val);
-	*** Single method or a set of type specific methods used throughout toolkit	+	** Single method or a set of type specific methods used throughout toolkit
-	** '''parameter methods''' => filter.Set''Name''(val);	+	* '''parameter methods''' => filter.Set''Name''(val);
-	*** This is how it's currently done in ITK	+	** This is how it's currently done in ITK

-	* Registration granularity:	+	==== Registration granularity ====
-	** Should transform, metric, optimizer, interpolation be modular like in ITK?	+	* Should transform, metric, optimizer, interpolation be modular like in ITK?

-	== Streaming ==	+	==== Streaming ====
-	An open question is how Filter Blocks / Procedural paradigm might support streaming. Based on Jim Miller's suggestion, we could build machinery to stream blocks through a list of filters. This assumes the readers and writers support random access to images on disk.	+	* An open question is how Filter Blocks / Procedural paradigm might support streaming. Based on Jim Miller's suggestion, we could build machinery to stream blocks through a list of filters. This assumes the readers and writers support random access to images on disk.

	== Gaussian Blur ==		== Gaussian Blur ==