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itkScalarImageToGreyLevelCooccurrenceMatrixGenerator.h

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00001 /*=========================================================================
00002 
00003   Program:   Insight Segmentation & Registration Toolkit
00004   Module:    $RCSfile: itkScalarImageToGreyLevelCooccurrenceMatrixGenerator.h,v $
00005   Language:  C++
00006   Date:      $Date: 2009-05-20 16:21:47 $
00007   Version:   $Revision: 1.10 $
00008 
00009   Copyright (c) Insight Software Consortium. All rights reserved.
00010   See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
00011 
00012      This software is distributed WITHOUT ANY WARRANTY; without even 
00013      the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
00014      PURPOSE.  See the above copyright notices for more information.
00015 
00016 =========================================================================*/
00017 #ifndef __itkScalarImageToGreyLevelCooccurrenceMatrixGenerator_h
00018 #define __itkScalarImageToGreyLevelCooccurrenceMatrixGenerator_h
00019 
00020 #include "itkImage.h"
00021 #include "itkHistogram.h"
00022 #include "itkDenseFrequencyContainer.h"
00023 #include "itkVectorContainer.h"
00024 #include "itkObject.h"
00025 #include "itkNumericTraits.h"
00026 #include "itkMacro.h"
00027 
00028 namespace itk {
00029 namespace Statistics {
00030 
00090 template< class TImageType,
00091           class THistogramFrequencyContainer = DenseFrequencyContainer >
00092 class ScalarImageToGreyLevelCooccurrenceMatrixGenerator : public Object
00093 {
00094 public:
00096   typedef ScalarImageToGreyLevelCooccurrenceMatrixGenerator Self;
00097   typedef Object                                            Superclass;
00098   typedef SmartPointer<Self>                                Pointer;
00099   typedef SmartPointer<const Self>                          ConstPointer;
00100 
00102   itkTypeMacro(ScalarImageToGreyLevelCooccurrenceMatrixGenerator, Object);
00103 
00105   itkNewMacro(Self);
00106 
00107   typedef TImageType                                      ImageType;
00108   typedef typename ImageType::Pointer                     ImagePointer;
00109   typedef typename ImageType::ConstPointer                ImageConstPointer;
00110   typedef typename ImageType::PixelType                   PixelType;
00111   typedef typename ImageType::RegionType                  RegionType;
00112   typedef typename ImageType::SizeType                    RadiusType;
00113   typedef typename ImageType::OffsetType                  OffsetType;
00114   typedef VectorContainer<unsigned char, OffsetType>      OffsetVector;
00115   typedef typename OffsetVector::Pointer                  OffsetVectorPointer;
00116   typedef typename OffsetVector::ConstPointer             OffsetVectorConstPointer;
00117     
00118   typedef typename NumericTraits<PixelType>::RealType     MeasurementType;
00119     
00120   typedef Histogram< MeasurementType, 2, THistogramFrequencyContainer >
00121                                                           HistogramType;
00122   typedef typename HistogramType::Pointer                 HistogramPointer;
00123   typedef typename HistogramType::ConstPointer            HistogramConstPointer;
00124   typedef typename HistogramType::MeasurementVectorType   MeasurementVectorType;
00125     
00126     
00127   itkStaticConstMacro(DefaultBinsPerAxis, unsigned int, 256);
00128     
00130   void Compute( void );
00131 
00133   itkSetConstObjectMacro( Input, ImageType );
00134   itkGetConstObjectMacro( Input, ImageType );
00136 
00140   itkSetConstObjectMacro( Offsets, OffsetVector );
00141   itkGetConstObjectMacro( Offsets, OffsetVector );
00142   void SetOffset( const OffsetType offset )
00143     {
00144     OffsetVectorPointer offsetVector = OffsetVector::New();
00145     offsetVector->push_back(offset);
00146     this->SetOffsets(offsetVector);
00147     }
00149 
00153   itkGetObjectMacro( Output, HistogramType );
00154 
00156   itkSetMacro( NumberOfBinsPerAxis, unsigned int );
00157   itkGetMacro( NumberOfBinsPerAxis, unsigned int );
00159 
00161   void SetPixelValueMinMax( PixelType min, PixelType max );
00162   itkGetMacro(Min, PixelType);
00163   itkGetMacro(Max, PixelType);
00165 
00168   itkSetMacro(Normalize, bool);
00169   itkGetMacro(Normalize, bool);
00170   itkBooleanMacro(Normalize);
00172 
00173 protected:
00174   ScalarImageToGreyLevelCooccurrenceMatrixGenerator();
00175   virtual ~ScalarImageToGreyLevelCooccurrenceMatrixGenerator() {};
00176   void PrintSelf(std::ostream& os, Indent indent) const;
00177   virtual void FillHistogram( RadiusType radius, RegionType region );
00178   
00179 private:
00180   ScalarImageToGreyLevelCooccurrenceMatrixGenerator(const Self&); //purposely not implemented
00181   void operator=(const Self&); //purposely not implemented
00182   void NormalizeHistogram( void );
00183   
00184   ImageConstPointer        m_Input;
00185   HistogramPointer         m_Output;
00186   OffsetVectorConstPointer m_Offsets;
00187   PixelType                m_Min;
00188   PixelType                m_Max;
00189 
00190   unsigned int            m_NumberOfBinsPerAxis;
00191   MeasurementVectorType   m_LowerBound;
00192   MeasurementVectorType   m_UpperBound;
00193   bool                    m_Normalize;
00194 
00195 };
00196 
00197 } // end of namespace Statistics 
00198 } // end of namespace itk 
00199 
00200 #ifndef ITK_MANUAL_INSTANTIATION
00201 #include "itkScalarImageToGreyLevelCooccurrenceMatrixGenerator.txx"
00202 #endif
00203 
00204 #endif
00205 

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