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itkNCCRegistrationFunction.h

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00001 /*=========================================================================
00002 
00003   Program:   Insight Segmentation & Registration Toolkit
00004   Module:    $RCSfile: itkNCCRegistrationFunction.h,v $
00005   Language:  C++
00006   Date:      $Date: 2009-01-26 21:45:52 $
00007   Version:   $Revision: 1.7 $
00008 
00009   Copyright (c) Insight Software Consortium. All rights reserved.
00010   See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
00011 
00012      This software is distributed WITHOUT ANY WARRANTY; without even 
00013      the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
00014      PURPOSE.  See the above copyright notices for more information.
00015 
00016 =========================================================================*/
00017 #ifndef __itkNCCRegistrationFunction_h
00018 #define __itkNCCRegistrationFunction_h
00019 
00020 #include "itkPDEDeformableRegistrationFunction.h"
00021 #include "itkPoint.h"
00022 #include "itkCovariantVector.h"
00023 #include "itkInterpolateImageFunction.h"
00024 #include "itkLinearInterpolateImageFunction.h"
00025 #include "itkCentralDifferenceImageFunction.h"
00026 
00027 namespace itk {
00028 
00052 template<class TFixedImage, class TMovingImage, class TDeformationField>
00053 class ITK_EXPORT NCCRegistrationFunction : 
00054   public PDEDeformableRegistrationFunction< TFixedImage,
00055     TMovingImage, TDeformationField>
00056 {
00057 public:
00058 
00060   typedef NCCRegistrationFunction     Self;
00061   typedef PDEDeformableRegistrationFunction< TFixedImage,
00062     TMovingImage, TDeformationField > Superclass;
00063   typedef SmartPointer<Self>          Pointer;
00064   typedef SmartPointer<const Self>    ConstPointer;
00065 
00067   itkNewMacro(Self);
00068 
00070   itkTypeMacro( NCCRegistrationFunction, 
00071     PDEDeformableRegistrationFunction );
00072 
00074   typedef typename Superclass::MovingImageType     MovingImageType;
00075   typedef typename Superclass::MovingImagePointer  MovingImagePointer;
00076 
00078   typedef typename Superclass::FixedImageType     FixedImageType;
00079   typedef typename Superclass::FixedImagePointer  FixedImagePointer;
00080   typedef typename FixedImageType::IndexType      IndexType;
00081   typedef typename FixedImageType::SizeType       SizeType;
00082   typedef typename FixedImageType::SpacingType    SpacingType;
00083 
00085   typedef typename Superclass::DeformationFieldType    DeformationFieldType;
00086   typedef typename Superclass::DeformationFieldTypePointer   
00087     DeformationFieldTypePointer;
00088 
00090   itkStaticConstMacro(ImageDimension, unsigned int,Superclass::ImageDimension);
00091 
00093   typedef typename Superclass::PixelType           PixelType;
00094   typedef typename Superclass::RadiusType          RadiusType;
00095   typedef typename Superclass::NeighborhoodType    NeighborhoodType;
00096 //  typedef typename Superclass::NeighborhoodType    BoundaryNeighborhoodType;
00097   typedef typename Superclass::FloatOffsetType     FloatOffsetType;
00098   typedef typename Superclass::TimeStepType        TimeStepType;
00099 
00101   typedef double                                                 CoordRepType;
00102   typedef InterpolateImageFunction<MovingImageType,CoordRepType> InterpolatorType;
00103 
00104   typedef typename InterpolatorType::Pointer         InterpolatorPointer;
00105   typedef typename InterpolatorType::PointType       PointType;
00106   typedef LinearInterpolateImageFunction<MovingImageType,CoordRepType>
00107                                                      DefaultInterpolatorType;
00108 
00110   typedef CovariantVector<double,itkGetStaticConstMacro(ImageDimension)> CovariantVectorType;
00111 
00113   typedef CentralDifferenceImageFunction<FixedImageType> GradientCalculatorType;
00114   typedef typename GradientCalculatorType::Pointer   GradientCalculatorPointer;
00115 
00117   void SetMovingImageInterpolator( InterpolatorType * ptr )
00118     { m_MovingImageInterpolator = ptr; }
00119 
00121   InterpolatorType * GetMovingImageInterpolator(void)
00122     { return m_MovingImageInterpolator; }
00123 
00125   virtual TimeStepType ComputeGlobalTimeStep(void * itkNotUsed(GlobalData)) const
00126     { return m_TimeStep; }
00127 
00130   virtual void *GetGlobalDataPointer() const
00131     {
00132     GlobalDataStruct *global = new GlobalDataStruct();
00133     return global;
00134     }
00136 
00138   virtual void ReleaseGlobalDataPointer( void *GlobalData ) const
00139     { delete (GlobalDataStruct *) GlobalData;  }
00140 
00142   virtual void InitializeIteration();
00143 
00146   virtual PixelType  ComputeUpdate(const NeighborhoodType &neighborhood,
00147                      void *globalData,
00148                      const FloatOffsetType &offset = FloatOffsetType(0.0));
00149 
00150 protected:
00151   NCCRegistrationFunction();
00152   ~NCCRegistrationFunction() {}
00153   void PrintSelf(std::ostream& os, Indent indent) const;
00154 
00156   typedef ConstNeighborhoodIterator<FixedImageType> FixedImageNeighborhoodIteratorType;
00157 
00160   struct GlobalDataStruct
00161     {
00162     FixedImageNeighborhoodIteratorType   m_FixedImageIterator;
00163     };
00164 
00165 private:
00166   NCCRegistrationFunction(const Self&); //purposely not implemented
00167   void operator=(const Self&); //purposely not implemented
00168 
00170   SpacingType                     m_FixedImageSpacing;
00171 
00173   GradientCalculatorPointer       m_FixedImageGradientCalculator;
00174 
00175 
00177   InterpolatorPointer             m_MovingImageInterpolator;
00178 
00180   TimeStepType                    m_TimeStep;
00181 
00183   double                          m_DenominatorThreshold;
00184 
00186   double                          m_IntensityDifferenceThreshold;
00187 
00188   mutable double                          m_MetricTotal;
00189 
00190 };
00191 
00192 
00193 } // end namespace itk
00194 
00195 #ifndef ITK_MANUAL_INSTANTIATION
00196 #include "itkNCCRegistrationFunction.txx"
00197 #endif
00198 
00199 #endif
00200 

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