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itkBayesianClassifierInitializationImageFilter.h

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00001 /*=========================================================================
00002 
00003   Program:   Insight Segmentation & Registration Toolkit
00004   Module:    $RCSfile: itkBayesianClassifierInitializationImageFilter.h,v $
00005   Language:  C++
00006   Date:      $Date: 2009-05-02 05:43:54 $
00007   Version:   $Revision: 1.8 $
00008 
00009   Copyright (c) Insight Software Consortium. All rights reserved.
00010   See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
00011 
00012      This software is distributed WITHOUT ANY WARRANTY; without even 
00013      the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
00014      PURPOSE.  See the above copyright notices for more information.
00015 
00016 =========================================================================*/
00017 #ifndef __itkBayesianClassifierInitializationImageFilter_h
00018 #define __itkBayesianClassifierInitializationImageFilter_h
00019 
00020 #include "itkVectorImage.h"
00021 #include "itkVectorContainer.h"
00022 #include "itkImageToImageFilter.h"
00023 #include "itkImageRegionIterator.h"
00024 #include "itkImageRegionConstIterator.h"
00025 #ifdef ITK_USE_REVIEW_STATISTICS
00026 #include "itkMembershipFunctionBase.h"
00027 #else
00028 #include "itkDensityFunction.h"
00029 #endif
00030 
00031 namespace itk
00032 {
00033   
00077 template< class TInputImage, class TProbabilityPrecisionType=float >
00078 class ITK_EXPORT BayesianClassifierInitializationImageFilter :
00079     public
00080 ImageToImageFilter<TInputImage, VectorImage< TProbabilityPrecisionType, 
00081                   ::itk::GetImageDimension< TInputImage >::ImageDimension > >
00082 {
00083 public:
00085   typedef BayesianClassifierInitializationImageFilter  Self;
00086   typedef TInputImage                                  InputImageType;
00087   typedef TProbabilityPrecisionType                    ProbabilityPrecisionType;
00088 
00090   itkStaticConstMacro( Dimension, unsigned int, 
00091                      ::itk::GetImageDimension< InputImageType >::ImageDimension );
00092 
00093   typedef VectorImage< ProbabilityPrecisionType, 
00094           itkGetStaticConstMacro(Dimension) >                   OutputImageType;
00095   typedef ImageToImageFilter< InputImageType, OutputImageType > Superclass;
00096   typedef SmartPointer<Self>                                    Pointer;
00097   typedef SmartPointer<const Self>                              ConstPointer;
00098 
00100   itkNewMacro(Self);
00101 
00103   itkTypeMacro(BayesianClassifierInitializationImageFilter, ImageToImageFilter);
00104 
00106   typedef ImageRegionConstIterator< InputImageType > InputImageIteratorType;
00107 
00109   typedef typename InputImageType::PixelType  InputPixelType;
00110   typedef typename OutputImageType::PixelType OutputPixelType;
00111 
00115   typedef VectorImage< ProbabilityPrecisionType, 
00116           itkGetStaticConstMacro(Dimension) >             MembershipImageType;
00117   typedef typename MembershipImageType::PixelType         MembershipPixelType;
00118   typedef typename MembershipImageType::Pointer           MembershipImagePointer;
00119   typedef ImageRegionIterator< MembershipImageType >      MembershipImageIteratorType;
00120 
00122   typedef Vector< InputPixelType, 1 >                     MeasurementVectorType;
00123 
00125 #ifdef ITK_USE_REVIEW_STATISTICS
00126   typedef Statistics::MembershipFunctionBase< MeasurementVectorType > MembershipFunctionType;
00127 #else
00128   typedef Statistics::DensityFunction< MeasurementVectorType >
00129                                                         MembershipFunctionType;
00130 #endif
00131 
00132   typedef typename MembershipFunctionType::Pointer      MembershipFunctionPointer;
00133 
00135   typedef VectorContainer< unsigned int, 
00136        MembershipFunctionPointer >  MembershipFunctionContainerType;
00137   typedef typename MembershipFunctionContainerType::Pointer
00138                                     MembershipFunctionContainerPointer;
00139 
00145   virtual void SetMembershipFunctions( MembershipFunctionContainerType 
00146                                                 * densityFunctionContainer );
00147   itkGetObjectMacro(  MembershipFunctionContainer, MembershipFunctionContainerType );
00149 
00151   itkSetMacro( NumberOfClasses, unsigned int );
00152   itkGetConstMacro( NumberOfClasses, unsigned int );
00154 
00155   virtual void GenerateOutputInformation(); 
00156 
00157 #ifdef ITK_USE_CONCEPT_CHECKING
00158 
00159   itkConceptMacro(InputMultiplyOperatorCheck,
00160     (Concept::MultiplyOperator<InputPixelType>));
00161   itkConceptMacro(DoubleConvertibleToProbabilityCheck,
00162     (Concept::Convertible<double, TProbabilityPrecisionType>));
00163   itkConceptMacro(InputHasNumericTraitsCheck,
00164     (Concept::HasNumericTraits<InputPixelType>));
00165   itkConceptMacro(ProbabilityHasNumericTraitsCheck,
00166     (Concept::HasNumericTraits<TProbabilityPrecisionType>));
00167   itkConceptMacro(DoublePlusInputCheck,
00168     (Concept::AdditiveOperators<double, InputPixelType>));
00169 
00171 #endif
00172 
00173 protected:
00174   BayesianClassifierInitializationImageFilter();
00175   virtual ~BayesianClassifierInitializationImageFilter() {}
00176   void PrintSelf(std::ostream& os, Indent indent) const;
00177 
00183   virtual void InitializeMembershipFunctions();
00184 
00186   virtual void GenerateData();
00187 
00188 private:
00189   BayesianClassifierInitializationImageFilter(const Self&); //purposely not implemented
00190   void operator=(const Self&); //purposely not implemented
00191 
00192   bool                      m_UserSuppliesMembershipFunctions;
00193   unsigned int              m_NumberOfClasses;
00194 
00195   typename MembershipFunctionContainerType::Pointer m_MembershipFunctionContainer;
00196 };
00197 
00198 } // end namespace itk
00199 
00200 #ifndef ITK_MANUAL_INSTANTIATION
00201 #include "itkBayesianClassifierInitializationImageFilter.txx"
00202 #endif
00203 
00204 #endif
00205 

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