#include <itkSpecialCoordinatesImage.h>
Inheritance diagram for itk::SpecialCoordinatesImage< TPixel, VImageDimension >:
SpecialCoordinatesImages are templated over a pixel type (modeling the dependent variables), and a dimension (number of independent variables). The container for the pixel data is the ImportImageContainer.
Within the pixel container, images are modeled as arrays, defined by a start index and a size.
Almost arbitrary mappings between index space & Cartesian physical space are possible, and so m_Origin and m_Spacing should be ignored. They exist only to allow the possibility of running a "spatially-aware" filter in raw index space, as if the SpecialCoordinatesImage data was laid out on a regular grid. Note that this may or may not produce useful results, and it is up the the user to determine the appropriateness of running a filter designed for normal images on special-coordinates images.
The only correct generic method for operating on a SpecialCoordinatesImage in physical space is to use the virtual functions TransformPhysicalPointToIndex, TransformPhysicalPointToContinuousIndex, TransformIndexToPhysicalPoint, and TransformContinuousIndexToPhysicalPoint. All of these methods transform points in Cartesian physical space to and from indices in the special (typically non-Cartesian) index space. It is also possible to check the type of coordinate representation being used by a SpecialCoordinatesImage, and then use representation-specific code to speed up the filter for certain coordinate representations, falling back to the generic method for unrecognized and/or unoptimized coordinate representations.
There are three sets of meta-data describing portians of a SpecialCoordinatesImages. These are "Region" objects that define a portion of an image via a starting index for the image array and a size. The ivar LargestPossibleRegion defines the size and starting index of the image dataset. The entire image dataset, however, need not be resident in memory. The region of the image that is resident in memory is defined by the "BufferedRegion". The Buffer is a contiguous block of memory. The third set of meta-data defines a region of interest, called the "RequestedRegion". The RequestedRegion is used by the pipeline execution model to define what a filter is requested to produce.
[RegionIndex, RegionSize] C [BufferIndex, BufferSize] C [ImageIndex, ImageSize]
Pixels can be accessed direcly using the SetPixel() and GetPixel() methods or can be accessed via iterators. Begin() creates an iterator that can walk a specified region of a buffer.
The pixel type may be one of the native types; a Insight-defined class type such as Vector; or a user-defined type. Note that depending on the type of pixel that you use, the process objects (i.e., those filters processing data objects) may not operate on the image and/or pixel type. This becomes apparent at compile-time because operator overloading (for the pixel type) is not supported.
The data in an image is arranged in a 1D array as [][][][slice][row][col] with the column index varying most rapidly. The Index type reverses the order so that with Index[0] = col, Index[1] = row, Index[2] = slice, ...
Definition at line 96 of file itkSpecialCoordinatesImage.h.
| static bool | GetGlobalReleaseDataFlag () |
| static void | SetGlobalReleaseDataFlag (const bool val) |
| void | GlobalReleaseDataFlagOff () |
| void | GlobalReleaseDataFlagOn () |
Public Types | |
| typedef DefaultPixelAccessorFunctor< Self > | AccessorFunctorType |
| typedef DefaultPixelAccessor< PixelType > | AccessorType |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef WeakPointer< const Self > | ConstWeakPointer |
| typedef Matrix< double, VImageDimension, VImageDimension > | DirectionType |
| typedef Superclass::IndexType | IndexType |
| typedef IndexType::IndexValueType | IndexValueType |
| typedef TPixel | InternalPixelType |
| typedef PixelType | IOPixelType |
| typedef Superclass::OffsetType | OffsetType |
| typedef OffsetType::OffsetValueType | OffsetValueType |
| typedef ImportImageContainer< unsigned long, PixelType > | PixelContainer |
| typedef PixelContainer::ConstPointer | PixelContainerConstPointer |
| typedef PixelContainer::Pointer | PixelContainerPointer |
| typedef TPixel | PixelType |
| typedef SmartPointer< Self > | Pointer |
| typedef Superclass::PointType | PointType |
| typedef Superclass::RegionType | RegionType |
| typedef SpecialCoordinatesImage | Self |
| typedef Superclass::SizeType | SizeType |
| typedef SizeType::SizeValueType | SizeValueType |
| typedef Superclass::SpacingType | SpacingType |
| typedef ImageBase< VImageDimension > | Superclass |
| typedef TPixel | ValueType |
Public Member Functions | |
| void | Allocate () |
| OffsetValueType | ComputeOffset (const IndexType &ind) const |
| virtual void | CopyInformation (const DataObject *data) |
| virtual LightObject::Pointer | CreateAnother () const |
| void | DataHasBeenGenerated () |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| virtual void | Delete () |
| void | DisconnectPipeline () |
| void | FillBuffer (const TPixel &value) |
| virtual const RegionType & | GetBufferedRegion () const |
| Command * | GetCommand (unsigned long tag) |
| bool | GetDataReleased () const |
| bool | GetDebug () const |
| virtual const DirectionType & | GetDirection () |
| virtual const RegionType & | GetLargestPossibleRegion () const |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| virtual unsigned long | GetMTime () const |
| virtual const char * | GetNameOfClass () const |
| virtual const PointType & | GetOrigin () |
| TPixel & | GetPixel (const IndexType &index) |
| const TPixel & | GetPixel (const IndexType &index) const |
| const AccessorType | GetPixelAccessor (void) const |
| AccessorType | GetPixelAccessor (void) |
| const PixelContainer * | GetPixelContainer () const |
| PixelContainer * | GetPixelContainer () |
| virtual int | GetReferenceCount () const |
| virtual const RegionType & | GetRequestedRegion () const |
| SmartPointerForwardReference< ProcessObject > | GetSource () const |
| unsigned int | GetSourceOutputIndex () const |
| virtual const SpacingType & | GetSpacing () |
| virtual unsigned long | GetUpdateMTime () const |
| virtual void | Graft (const DataObject *data) |
| bool | HasObserver (const EventObject &event) const |
| virtual void | Initialize () |
| void | InvokeEvent (const EventObject &) const |
| void | InvokeEvent (const EventObject &) |
| itkStaticConstMacro (ImageDimension, unsigned int, VImageDimension) | |
| virtual void | Modified () const |
| const TPixel & | operator[] (const IndexType &index) const |
| TPixel & | operator[] (const IndexType &index) |
| virtual void | PrepareForNewData () |
| void | Print (std::ostream &os, Indent indent=0) const |
| virtual void | Register () const |
| void | ReleaseData () |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| virtual bool | RequestedRegionIsOutsideOfTheBufferedRegion () |
| virtual void | ResetPipeline () |
| virtual void | SetBufferedRegion (const RegionType ®ion) |
| void | SetDebug (bool debugFlag) const |
| virtual void | SetDirection (const DirectionType direction) |
| virtual void | SetLargestPossibleRegion (const RegionType ®ion) |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| void | SetPixel (const IndexType &index, const TPixel &value) |
| void | SetPixelContainer (PixelContainer *container) |
| virtual void | SetReferenceCount (int) |
| void | SetRegions (SizeType size) |
| virtual void | SetRequestedRegion (DataObject *data) |
| virtual void | SetRequestedRegion (const RegionType ®ion) |
| virtual void | SetRequestedRegionToLargestPossibleRegion () |
| bool | ShouldIReleaseData () const |
| template<class TCoordRep> | |
| bool | TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point, ContinuousIndex< TCoordRep, VImageDimension > &index) const |
| template<class TCoordRep> | |
| bool | TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point, IndexType &index) const |
| virtual void | UnRegister () const |
| virtual void | Update () |
| virtual void | UpdateOutputInformation () |
| virtual bool | VerifyRequestedRegion () |
| unsigned long | AddObserver (const EventObject &event, Command *) const |
| unsigned long | AddObserver (const EventObject &event, Command *) |
| IndexType | ComputeIndex (OffsetValueType offset) const |
| const TPixel * | GetBufferPointer () const |
| TPixel * | GetBufferPointer () |
| virtual unsigned int | GetNumberOfComponentsPerPixel () const |
| virtual void | SetNumberOfComponentsPerPixel (unsigned int) |
| const OffsetValueType * | GetOffsetTable () const |
| virtual const unsigned long & | GetPipelineMTime () |
| void | SetPipelineMTime (unsigned long time) |
| virtual const bool & | GetReleaseDataFlag () |
| virtual void | ReleaseDataFlagOff () |
| virtual void | ReleaseDataFlagOn () |
| void | SetReleaseDataFlag (bool flag) |
| virtual void | PropagateRequestedRegion () throw (InvalidRequestedRegionError) |
| virtual void | UpdateOutputData () |
| virtual void | SetOrigin (const float[VImageDimension]) |
| virtual void | SetOrigin (const double[VImageDimension]) |
| virtual void | SetOrigin (const PointType) |
| virtual void | SetSpacing (const float[VImageDimension]) |
| virtual void | SetSpacing (const double[VImageDimension]) |
| virtual void | SetSpacing (const SpacingType &) |
| void | SetRegions (RegionType region) |
| template<class TCoordRep> | |
| void | TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TCoordRep, VImageDimension > &index, Point< TCoordRep, VImageDimension > &point) const |
| template<class TCoordRep> | |
| void | TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, VImageDimension > &point) const |
| template<class TCoordRep> | |
| void | TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const |
Static Public Member Functions | |
| static void | BreakOnError () |
| static unsigned int | GetImageDimension () |
| static Pointer | New () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static void | SetGlobalWarningDisplay (bool flag) |
Protected Types | |
| typedef int | InternalReferenceCountType |
Protected Member Functions | |
| virtual void | ComputeIndexToPhysicalPointMatrices () |
| void | ComputeOffsetTable () |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual void | PropagateResetPipeline () |
| SpecialCoordinatesImage () | |
| virtual | ~SpecialCoordinatesImage () |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
Protected Attributes | |
| DirectionType | m_Direction |
| DirectionType | m_IndexToPhysicalPoint |
| PointType | m_Origin |
| DirectionType | m_PhysicalPointToIndex |
| InternalReferenceCountType | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
| SpacingType | m_Spacing |
| typedef DefaultPixelAccessorFunctor< Self > itk::SpecialCoordinatesImage< TPixel, VImageDimension >::AccessorFunctorType |
Accessor functor to choose between accessors: DefaultPixelAccessor for the Image, and DefaultVectorPixelAccessor for the vector image. The functor provides a generic API between the two accessors.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 134 of file itkSpecialCoordinatesImage.h.
| typedef DefaultPixelAccessor< PixelType > itk::SpecialCoordinatesImage< TPixel, VImageDimension >::AccessorType |
Accessor type that convert data between internal and external representations.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 129 of file itkSpecialCoordinatesImage.h.
| typedef SmartPointer<const Self> itk::SpecialCoordinatesImage< TPixel, VImageDimension >::ConstPointer |
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 103 of file itkSpecialCoordinatesImage.h.
| typedef WeakPointer<const Self> itk::SpecialCoordinatesImage< TPixel, VImageDimension >::ConstWeakPointer |
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 104 of file itkSpecialCoordinatesImage.h.
typedef Matrix<double, VImageDimension, VImageDimension> itk::ImageBase< VImageDimension >::DirectionType [inherited] |
Direction typedef support. The Direction is a matix of direction cosines that specify the direction between samples.
Reimplemented in itk::Image< TPixel, VImageDimension >, itk::ImageAdaptor< TImage, TAccessor >, itk::OrientedImage< TPixel, VImageDimension >, itk::VectorImage< TPixel, VImageDimension >, itk::Image< itk::BloxCoreAtomPixel< NDimension >, TImageDimension >, itk::Image< TNode *, VImageDimension >, itk::Image< itk::BloxBoundaryProfilePixel< TImageDimension >, TImageDimension >, itk::Image< TBloxPixelType, TImageDimension >, itk::Image< itk::BloxBoundaryPointPixel< TImageDimension >, TImageDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::VectorImage< TPixelType, Dimension >.
Definition at line 137 of file itkImageBase.h.
| typedef Superclass::IndexType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::IndexType |
Index typedef support. An index is used to access pixel values.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 146 of file itkSpecialCoordinatesImage.h.
typedef IndexType::IndexValueType itk::ImageBase< VImageDimension >::IndexValueType [inherited] |
Reimplemented in itk::BloxCoreAtomImage< NDimension >, itk::Image< TPixel, VImageDimension >, itk::ImageAdaptor< TImage, TAccessor >, itk::PhasedArray3DSpecialCoordinatesImage< TPixel >, itk::VectorImage< TPixel, VImageDimension >, itk::Image< itk::BloxCoreAtomPixel< NDimension >, TImageDimension >, itk::Image< TNode *, VImageDimension >, itk::Image< itk::BloxBoundaryProfilePixel< TImageDimension >, TImageDimension >, itk::Image< TBloxPixelType, TImageDimension >, itk::Image< itk::BloxBoundaryPointPixel< TImageDimension >, TImageDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::VectorImage< TPixelType, Dimension >.
Definition at line 110 of file itkImageBase.h.
| typedef TPixel itk::SpecialCoordinatesImage< TPixel, VImageDimension >::InternalPixelType |
Internal Pixel representation. Used to maintain a uniform API with Image Adaptors and allow to keep a particular internal representation of data while showing a different external representation.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 123 of file itkSpecialCoordinatesImage.h.
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
| typedef PixelType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::IOPixelType |
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 125 of file itkSpecialCoordinatesImage.h.
| typedef Superclass::OffsetType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::OffsetType |
Offset typedef support. An offset is used to access pixel values.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 149 of file itkSpecialCoordinatesImage.h.
typedef OffsetType::OffsetValueType itk::ImageBase< VImageDimension >::OffsetValueType [inherited] |
Reimplemented in itk::Image< TPixel, VImageDimension >, itk::ImageAdaptor< TImage, TAccessor >, itk::VectorImage< TPixel, VImageDimension >, itk::Image< itk::BloxCoreAtomPixel< NDimension >, TImageDimension >, itk::Image< TNode *, VImageDimension >, itk::Image< itk::BloxBoundaryProfilePixel< TImageDimension >, TImageDimension >, itk::Image< TBloxPixelType, TImageDimension >, itk::Image< itk::BloxBoundaryPointPixel< TImageDimension >, TImageDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::VectorImage< TPixelType, Dimension >.
Definition at line 115 of file itkImageBase.h.
| typedef ImportImageContainer<unsigned long, PixelType> itk::SpecialCoordinatesImage< TPixel, VImageDimension >::PixelContainer |
Container used to store pixels in the image.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 143 of file itkSpecialCoordinatesImage.h.
| typedef PixelContainer::ConstPointer itk::SpecialCoordinatesImage< TPixel, VImageDimension >::PixelContainerConstPointer |
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 169 of file itkSpecialCoordinatesImage.h.
| typedef PixelContainer::Pointer itk::SpecialCoordinatesImage< TPixel, VImageDimension >::PixelContainerPointer |
A pointer to the pixel container.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 168 of file itkSpecialCoordinatesImage.h.
| typedef TPixel itk::SpecialCoordinatesImage< TPixel, VImageDimension >::PixelType |
Pixel typedef support. Used to declare pixel type in filters or other operations.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 110 of file itkSpecialCoordinatesImage.h.
| typedef SmartPointer<Self> itk::SpecialCoordinatesImage< TPixel, VImageDimension >::Pointer |
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 102 of file itkSpecialCoordinatesImage.h.
| typedef Superclass::PointType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::PointType |
Origin typedef support. The origin is the "fake" geometric coordinates of the index (0,0). Also for use w/ filters designed for normal images.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 165 of file itkSpecialCoordinatesImage.h.
| typedef Superclass::RegionType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::RegionType |
Region typedef support. A region is used to specify a subset of an image.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 155 of file itkSpecialCoordinatesImage.h.
| typedef SpecialCoordinatesImage itk::SpecialCoordinatesImage< TPixel, VImageDimension >::Self |
Standard class typedefs
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 100 of file itkSpecialCoordinatesImage.h.
| typedef Superclass::SizeType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::SizeType |
Size typedef support. A size is used to define region bounds.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 152 of file itkSpecialCoordinatesImage.h.
typedef SizeType::SizeValueType itk::ImageBase< VImageDimension >::SizeValueType [inherited] |
Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >.
Definition at line 119 of file itkImageBase.h.
| typedef Superclass::SpacingType itk::SpecialCoordinatesImage< TPixel, VImageDimension >::SpacingType |
Spacing typedef support. Spacing holds the "fake" size of a pixel, making each pixel look like a 1 unit hyper-cube to filters that were designed for normal images and that therefore use m_Spacing. The spacing is the geometric distance between image samples.
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 161 of file itkSpecialCoordinatesImage.h.
| typedef ImageBase<VImageDimension> itk::SpecialCoordinatesImage< TPixel, VImageDimension >::Superclass |
Reimplemented from itk::ImageBase< VImageDimension >.
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 101 of file itkSpecialCoordinatesImage.h.
| typedef TPixel itk::SpecialCoordinatesImage< TPixel, VImageDimension >::ValueType |
Typedef alias for PixelType
Reimplemented in itk::PhasedArray3DSpecialCoordinatesImage< TPixel >.
Definition at line 117 of file itkSpecialCoordinatesImage.h.
| itk::SpecialCoordinatesImage< TPixel, VImageDimension >::SpecialCoordinatesImage | ( | ) | [protected] |
| virtual itk::SpecialCoordinatesImage< TPixel, VImageDimension >::~SpecialCoordinatesImage | ( | ) | [inline, protected, virtual] |
Definition at line 314 of file itkSpecialCoordinatesImage.h.
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| void itk::SpecialCoordinatesImage< TPixel, VImageDimension >::Allocate | ( | ) |
Allocate the image memory. The size of the image must already be set, e.g. by calling SetRegions().
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| IndexType itk::ImageBase< VImageDimension >::ComputeIndex | ( | OffsetValueType | offset | ) | const [inline, inherited] |
Compute the index of the pixel at a specified offset from the beginning of the buffered region. Bounds checking is not performed. Thus, the computed index could be outside the BufferedRegion. To ensure a valid index, the parameter "offset" should be between 0 and the number of pixels in the BufferedRegion (the latter can be found using ImageRegion::GetNumberOfPixels()).
Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >.
Definition at line 321 of file itkImageBase.h.
| virtual void itk::ImageBase< VImageDimension >::ComputeIndexToPhysicalPointMatrices | ( | ) | [protected, virtual, inherited] |
Compute helper matrices used to transform Index coordinates to PhysicalPoint coordinates and back. This method is virtual and will be overloaded in derived classes in order to provide backward compatibility behavior in classes that did not used to take image orientation into account.
Reimplemented in itk::Image< TPixel, VImageDimension >, itk::OrientedImage< TPixel, VImageDimension >, itk::Image< itk::BloxCoreAtomPixel< NDimension >, TImageDimension >, itk::Image< TNode *, VImageDimension >, itk::Image< itk::BloxBoundaryProfilePixel< TImageDimension >, TImageDimension >, itk::Image< TBloxPixelType, TImageDimension >, and itk::Image< itk::BloxBoundaryPointPixel< TImageDimension >, TImageDimension >.
| OffsetValueType itk::ImageBase< VImageDimension >::ComputeOffset | ( | const IndexType & | ind | ) | const [inline, inherited] |
Compute an offset from the beginning of the buffer for a pixel at the specified index. The index is not checked as to whether it is inside the current buffer, so the computed offset could conceivably be outside the buffer. If bounds checking is needed, one can call ImageRegion::IsInside(ind) on the BufferedRegion prior to calling ComputeOffset.
Definition at line 285 of file itkImageBase.h.
| void itk::ImageBase< VImageDimension >::ComputeOffsetTable | ( | ) | [protected, inherited] |
Calculate the offsets needed to move from one pixel to the next along a row, column, slice, volume, etc. These offsets are based on the size of the BufferedRegion. This should be called after the BufferedRegion is set.
| virtual void itk::ImageBase< VImageDimension >::CopyInformation | ( | const DataObject * | data | ) | [virtual, inherited] |
Copy information from the specified data set. This method is part of the pipeline execution model. By default, a ProcessObject will copy meta-data from the first input to all of its outputs. See ProcessObject::GenerateOutputInformation(). Each subclass of DataObject is responsible for being able to copy whatever meta-data it needs from from another DataObject. ImageBase has more meta-data than its DataObject. Thus, it must provide its own version of CopyInformation() in order to copy the LargestPossibleRegion from the input parameter.
Reimplemented from itk::DataObject.
Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >,